Brassica napus (rape): 106376138
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Entry
106376138 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT4
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106376138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106376138
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106376138
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106376138
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
Motif
Other DBs
NCBI-GeneID:
106376138
NCBI-ProteinID:
XP_013671653
UniProt:
A0A078G316
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All DBs
Position
C1:15941828..15943676
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AA seq
322 aa
AA seq
DB search
METDSMESSTRSVQNDEIHHNGTFHFSSTKSHGGGGGASPAVVTNIVGPTATSVYELLEC
PVCTCSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKF
YNLGCPEIFPYYSKLKHESLCNFRPYGCPYAGSECGVVGDIPFLVSHLRDDHKVDMHAGS
TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEEAR
SYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRV
TGKIWKEQHSPDSGLFMPNLSS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggatagtatggaatcgtcgacgagaagcgttcagaacgatgagatccatcac
aacggaactttccacttctcttccaccaagagccacggcggcggcggaggcgcttctccc
gccgtcgttaccaatatagtcggtcccacggcgactagcgtctacgagcttctcgagtgc
cctgtctgtacatgttctatgtatcctcctatccatcagtgtcataatggacacacgtta
tgttctacctgtaaagtgagagttcataaccggtgtcccacctgtagacaagagcttggt
gatataagatgtttagctcttgagaaagttgccgagtcccttgagcttccttgcaagttt
tacaacctcggatgccctgagatttttccttattacagcaaactgaaacacgagtctctt
tgtaacttcagaccttacggttgtccttatgctggctccgagtgtggtgtcgtaggagac
atccctttccttgtttcccatctcagggatgatcataaagtcgacatgcacgctggttcc
actttcaaccaccgttatgtcaagtctaatccgcgtgaagtggagaacgccacttggatg
ctaaccgtgtttcattgctttgggcaatacttctgcctccattttgaggcgttccagctc
gggatgggtccggtatacatggcgttcctgagattcatgggtgacgaggaagaagcgcgg
agctacagctatagcttagaagttggtggcagtgggaggaaactaacatgggaaggaaca
ccaagaagcatcagagatagccacaggaaagtaagagacagcaacgacggtctcatcatc
cagaggaacatggctctcttcttctccggaggcgataggaaagagcttaaacttagagtc
accggtaaaatctggaaagagcaacacagtccagattctgggcttttcatgccaaaccta
tcttcctga
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