Brassica napus (rape): 106414408
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Entry
106414408 CDS
T04128
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B isoform X2
KO
K03253
translation initiation factor 3 subunit B
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106414408
03012 Translation factors [BR:
bna03012
]
106414408
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106414408
Translation factors [BR:
bna03012
]
Eukaryotic type
Initiation factors
eIF-3
106414408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
ANAPC4_WD40
Coatomer_WDAD
IKI3
DUF5734
Motif
Other DBs
NCBI-GeneID:
106414408
NCBI-ProteinID:
XP_013710525
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Position
C7:48868912..48871542
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AA seq
402 aa
AA seq
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MFTADKRVPSRWSPQGTFFVTAADHNMVIIWGSRYCTDFGQLLRFCHYQVEEFDISPGEK
YLVTYSKPKPSDPNGLWLKIFDVKTGTAIVGLNNVDVADSPQWPLIIRWAGGKDDKFFAI
ISKNKTVAVYETKKFNLLGNAPLLLDDVIDISWSPTQAVLAILLKASDKQPVKVVLLQFP
NNVKLAEKDLTAILGDCTMRWQSNGEYLAVNTYGGFEFFRIKEEGIPTDSLRVDKKILAF
AWEPSGHRFAVIYGDEPTLSVSFYSMKKTPGKVTELTTLSNRQADALFWSPKGNRIVLAG
LKEGNLEFFDVDQLAQISPVANVVANQVAWNQSGKYVATVFTTPQEKFHSDCHSEPDDPR
ESFTIWSSDGKRLFVHQCQFPITQLDWRPYGGIIDDDMLKKQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgctgataagagggtgccttcgcggtggtctcctcaaggtacattctttgtc
acagcagctgaccacaacatggtcattatttggggctcaagatattgtacggactttggc
caactcttgcgtttttgtcattatcaggtagaagagtttgatatttccccaggtgaaaaa
tacctggtcacctatagcaaaccaaaaccaagtgatccaaatggactctggcttaagatc
ttcgatgtgaaaactgggacagcaatcgttggactaaataatgttgatgttgctgattcc
ccccagtggcctcttattataagatgggctgggggtaaagatgataaattctttgccatt
attagcaaaaacaagactgtagctgtctacgagaccaagaaattcaacctgttgggcaac
gccccactgctccttgatgatgttatagatatttcctggtctcctactcaagctgtactt
gcaatactgttgaaagcaagtgacaagcagcctgtcaaggttgttcttctgcaattcccc
aacaacgttaagctggccgagaaggatcttaccgctattcttggcgactgcacgatgcgc
tggcagagcaatggtgagtacctcgctgtcaatacttacgggggatttgagtttttccgc
atcaaagaggaaggcatacccacagattctctcagggtggacaagaagatcctggctttt
gcgtgggagcctagcggtcaccgatttgctgtgatttacggagacgaaccaactctatct
gtcagtttctactcgatgaagaagacacctggaaaggtcacagagcttactactttgagc
aacaggcaagcagatgctctattttggtcgcccaaaggcaatcgcattgttcttgctgga
ttgaaagagggcaaccttgagttttttgatgtggatcagcttgctcaaatttccccagtt
gcaaacgtggtggccaaccaggttgcttggaatcaaagtggaaaatatgttgccacggtg
tttacaactccacaagagaagtttcatagtgattgtcacagtgaaccagatgaccctcgt
gagagttttactatctggtcctccgatggaaagcgtctttttgttcatcagtgtcaattt
cctataacccagctggattggcgcccttacggaggaatcatagatgatgacatgcttaag
aagcaatga
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