Brassica napus (rape): 106445446
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Entry
106445446 CDS
T04128
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106445446
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
106445446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
106445446
NCBI-ProteinID:
XP_013742461
UniProt:
A0A816JUV7
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Position
C4:complement(51728249..51732090)
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AA seq
690 aa
AA seq
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MADVTLPPPDSVDIRPPENTTTSLPPPQQDHEPQEQQQPPQRDSRERRDDRDLERPPNRC
DRSPLPPPPRRDYKRRPSGSPPPPYRDRRHSPPMRRSPPPPKRYRRDDNGYDGRRGGGYG
PPDRRFGYENDREMGGRHGYGDERPPGRFMGRYQDWEGGRGGYGDASNRGSTQRDGLMSY
KQFIQELEDDILPSEAERRYQEYKSEYITTQKRVYFNTHKEEEWLKDKYHPTNLLTVIEK
RNEHARKVAKDFLLELQSGNLDLGPAVTALNKTSEPKSEDEAGGGGGGKRGKESDFSAAP
KAPSFTSDPKRILTDIEQAQALVRKLDSEKGIVDNVLSSSETETSGKDKSHSGSTGPVII
IRGLTSVKGLEGVELLDTLITYLWRVHGVDYYGKVETSEAKGLRHVRAEGKGPDAKGDEG
EDKFDSHWQQRLKGQDPLEVMAAKEKLDAAAIEALDPHVRKIRDEKYGWKYGCGAKGCTK
LFHAAEFVHKHLKLKHAELIVDMTVKVREELYFQNYMNDPNAPGGQPATQQPGPRDRPMM
RRKPSMESRLRDDRGGRRERDRIDRSEDQQRGDGNGPNGPNPEEGGYDAFGGQGGVHVPS
YSADMNAPPVLMPVPGAGPLGPFVPAPPEFAMQMFRDPSGPNPPLEGGGRGGPAPFLLSP
AFRQDPRRLRSYQDLDAPEEEVTVIDYRSL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtgacgctccctccgcctgattccgtcgacatccgtcccccggagaatacc
accacctctcttcctccgccacagcaggaccatgagccgcaagagcagcagcagcctcct
cagagagattcccgcgagagacgcgacgacagagacctagaacgtccgcctaatcgctgt
gaccgttctcccctcccgccgccgccccgcagggactacaagaggcggcctagcgggagc
cctccgccgccgtacagagacaggcggcactctcctcccatgcgccgctcgcctcctcct
cccaagcgctaccggagggacgataacggatacgatggtcggcgtggtggtggctatgga
cctcccgatagaagatttggatatgagaatgaccgtgaaatgggtggaaggcatggttac
ggtgatgaaagacctcctggccgcttcatggggcgctatcaagactgggagggaggtcgt
ggaggttatggtgatgcatctaacagaggaagtactcaaagggacggattgatgtcatac
aagcagtttatccaggagctggaagatgatatattgccatcagaagctgaacgcagatat
caagaatacaagtcagagtatatcacaacacagaaacgtgtctattttaacactcacaaa
gaggaagaatggttaaaagacaagtatcatccaaccaacttgctaactgtcatagaaaag
aggaatgaacatgcacggaaggtggcgaaggacttcttacttgagttacagagcgggaat
cttgatttaggtcctgcagtgacagcactgaataaaacaagtgagccaaagtctgaggat
gaagcaggtggtggtggtggtggtaaaagaggtaaagagagtgacttttcagcggcacca
aaagcacccagcttcacttctgacccaaagagaatcctaactgacattgagcaagcacaa
gcccttgttcgtaagctggactctgagaaaggaatcgtggataatgttttatcaagttca
gaaactgaaacgtcgggaaaagataagtcgcacagtggctcgactggtccagttataatc
ataagaggtttgacatctgtgaaaggcctcgagggtgttgaattgcttgacacgcttatc
acgtatctctggcgtgttcatggtgtggactattacggaaaggttgaaacaagcgaagct
aagggtctgcggcatgtgagagcggaaggaaaaggccctgatgcgaaaggagatgagggt
gaagataaatttgattctcattggcaacagaggttgaaaggtcaagatccactggaagtg
atggctgccaaagagaagctagatgctgctgctattgaagctttagatccacatgtccga
aagattagggatgagaagtatggttggaaatatggttgtggagctaaaggctgcacgaaa
ctgtttcatgctgctgaatttgtgcacaagcatctcaagctgaagcacgctgagcttata
gtggatatgactgtcaaagtgcgggaagaactgtattttcagaactatatgaatgatcct
aatgctccaggaggacaaccagccacgcagcaacctggcccgagagatagacctatgatg
agacgtaaaccaagcatggagagcagattgagggatgatcgaggtggacgcagagagcgt
gacagaattgatcggtcagaggatcagcagagaggtgatggtaacggtcctaatggtcct
aatcccgaggaaggtggttacgatgcatttggtggacaaggcggtgttcatgttccttcc
tactctgctgatatgaacgcaccgccagtgctcatgcctgttcccggtgccgggccacta
ggaccatttgtaccagcaccacctgagtttgcaatgcagatgttcagggacccaagcgga
ccaaaccctcctttagaaggtggtggcagaggtggaccagccccttttcttttgtctccg
gcctttagacaggatcctagacggctacgcagctaccaagacctagatgctccagaggaa
gaggtaaccgttattgattataggagcttgtag
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