Bifidobacterium animalis subsp. animalis ATCC 25527: BANAN_02170
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Entry
BANAN_02170 CDS
T02047
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bni
Bifidobacterium animalis subsp. animalis ATCC 25527
Brite
KEGG Orthology (KO) [BR:
bni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bni03016
]
BANAN_02170
Enzymes [BR:
bni01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BANAN_02170
Transfer RNA biogenesis [BR:
bni03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BANAN_02170
Prokaryotic type
BANAN_02170
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AFI62654
LinkDB
All DBs
Position
514055..515107
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AA seq
350 aa
AA seq
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MGTGKRDAKVNGVLIVDKPQGVTSHDIVAAVRAALRTRKVGHAGTLDPMATGALVIGVGQ
ATRLLQYIVEHTKTYSATMRFGQRTTTDDADGEFVERKSTAAMLPTLEQVCEAVTNEYTG
DIEQIPNAVSAIKVHGQRAYDLAREGRHVDLKARRVTVHAFDVLGGRQTQAADGTPVFDV
DVRVTCSAGTYIRALARDLGNDFHCGAHLTRLRREAVGAFRVRDARIVRAHAEARTFVNR
DGEEITRNRAVLDCVGEDLAGHLLTMVQAAQLTLPVLAVSEAQAADLRFGRRIVAQAPTD
DERPAHHHGEHVWAAIGSADGEPEVVAIVERAKHHEFKPVTVFAANTGNE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaccggaaaacgcgacgcgaaggtgaacggcgtgctcattgtagacaagccgcag
ggcgtgaccagtcacgacatcgtggcggccgtgcgtgccgcgctgcgcaccaggaaggtg
gggcacgccggcacgctcgacccgatggccaccggcgcgctcgtgatcggcgtgggccaa
gccacgcgcctgctgcagtacattgtcgagcatacgaaaacctacagcgccacgatgcgc
ttcggtcagcgcacgaccaccgatgacgccgacggtgagttcgtggaacggaaatccacg
gccgccatgctgccgacgctcgaacaggtgtgcgaagccgtgacgaacgaatacaccggc
gacatcgaacagattccaaacgccgtctccgcgatcaaggtgcacggccaacgcgcctac
gatctggcccgtgaagggcggcatgtcgatctcaaggcgcgccgggtgaccgtgcatgcg
ttcgatgtgctcggtggtcggcaaacgcaggccgcggacggcacgccggtgttcgatgtc
gacgtgcgcgtcacctgctcggcaggtacctacattcgcgcgctcgcccgcgatctcggc
aatgatttccattgcggcgcgcatctgacccgcctgcgcagggaagcggtgggggcgttc
cgcgtacgtgacgcccgcattgtgcgcgcgcatgccgaggcacgcaccttcgtgaaccgc
gacggcgaggagatcacccgcaatcgcgcggtgctcgattgtgtgggagaagatttggcc
gggcatctgctcacgatggtgcaggccgcacagctcacgctgccggtgctcgccgtgagt
gaagcgcaggcggcggatttgcgtttcggtaggagaatcgttgcacaggcaccgaccgac
gatgaacgaccggcacaccaccacggcgagcacgtgtgggccgccattgggtccgccgat
ggcgagcctgaagtcgtggcgattgtcgagcgcgcgaaacaccacgaattcaagccggtg
acggtgttcgcggcgaatacgggaaacgagtag
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