Bordetella parapertussis 12822: BPP0172
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Entry
BPP0172 CDS
T00140
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa00521
Streptomycin biosynthesis
bpa00523
Polyketide sugar unit biosynthesis
bpa00541
O-Antigen nucleotide sugar biosynthesis
bpa01100
Metabolic pathways
bpa01110
Biosynthesis of secondary metabolites
bpa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BPP0172 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BPP0172 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BPP0172 (rfbD)
Enzymes [BR:
bpa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
BPP0172 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
CAE39913
UniProt:
Q7W220
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Position
complement(185401..186357)
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AA seq
318 aa
AA seq
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MGGGHRQRRIPPLARYALRHMNILLLGRTGQIGDALLAHPLAWARLAALERRQADLRDLG
RLAAVLDAYAPRILINAAAYTEVDRAEAEPELALRINAQAVAVMADYARRNNALLVHYST
DYVFDGKRARAYRETDAAHPLNAYGRSKLAGEQAIAASGCPHLILRTSWVYASHGANFVK
TILRLARTRAELSVVADQHGAPTWAGRIAAVTWQAIDAHRRRRLPDGLWHLSAGGHVSWH
GLACHIVARARRAGLALSLDPAHIRPVTTAQYPLPAPRPANSRLDCGALRDALEPELPDW
QVDLDAVVDALAARAHTL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgggtggcggacatcgccagcggcgcataccgccactggctcgatacgcattacgacac
atgaatatcctgctactgggccgcaccggacagatcggcgacgcgttgctggctcacccg
ctggcatgggcgcggctggccgcgctggagcgccgccaggccgacctgcgcgacctgggc
cggctggccgccgtgctcgatgcctacgcgccgcgcatactgatcaatgccgccgcctat
accgaagtcgaccgtgccgaggccgagccggagctggcgctgcgcatcaatgcccaggcg
gtggcggtcatggcagactacgcgcgccgcaacaacgccttgctggttcactattccacc
gactacgtattcgacggcaagcgcgcccgcgcctaccgggaaaccgacgccgcacatccg
ctgaacgcctacggccgctccaagctggctggcgagcaagccatcgcggccagcggctgc
ccgcacctgatactgcgcaccagctgggtctacgccagccatggcgccaatttcgtcaag
accatcctgcgcctggcgcgcacccgcgccgagctgtccgtggtcgccgaccagcacggc
gccccgacctgggcgggccgtatcgccgccgtcacctggcaggcgatcgatgcgcaccgg
cgccgccgcctgcccgacggcctgtggcacctgagcgcgggcggccatgtcagctggcac
gggctggcctgccacatcgtggcgcgggcccggcgcgccgggctggcgctgagcctggac
ccggcgcacatccggcccgtcacgacggcgcaatatccgctgccggcgccacgcccggcc
aattcgcggctggactgcggcgcgctgcgcgatgccctggagcccgagctgcccgactgg
caagtcgacctggatgcggtcgtggatgccctggccgcgcgggcgcataccctgtag
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