Bordetella parapertussis 12822: BPP1086
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Entry
BPP1086 CDS
T00140
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bpa
Bordetella parapertussis 12822
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpa03021
]
BPP1086
Transcription machinery [BR:
bpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPP1086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
CAE36387
UniProt:
Q7WBB9
LinkDB
All DBs
Position
1159904..1160431
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AA seq
175 aa
AA seq
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MRPEDEALIVACIPSLRRYARGLTGERDRADDLVQDTLERAWSRFSRWQRRGELRAWMFG
IMHNQFIDGLRAQKRQADYGAETEIPELPVRATQADRLEVRDLDRHLQRLPADLRAVLLL
VAVEEFTYREAAQVLEVPIGTVMSRLSRARERLAALLQVQAEAPAASTVQRIRAT
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgaagacgaggccctgatcgtggcctgcatccccagcctgcgccgctacgcg
cgcgggctgacgggcgagcgcgaccgggccgatgacctggtccaggacacgctggagcgt
gcctggagccggttttcgcgctggcagcggcgcggggagttgcgcgcctggatgttcggc
atcatgcacaatcaattcatcgacggcttgcgggcgcaaaagcgccaggccgattacggg
gccgagaccgagatcccggagctgcccgtgcgcgcgacccaggccgaccggctcgaagtg
cgcgacctggaccggcacctgcaacggctgccggcggacctgcgcgcggtgctgctgctg
gtcgccgtcgaggagttcacctaccgcgaagccgcgcaggtgctggaggtgccgataggc
accgtcatgtcccgcctgtcgcgcgcgcgcgagcgcctggccgcgctgctgcaggtccag
gccgaggcgccggccgccagcaccgtccagcggatcagagccacatga
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