Butyrivibrio proteoclasticus: bpr_I1637
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Entry
bpr_I1637 CDS
T01292
Name
(GenBank) HD/KH domain-containing protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bpr_I1637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpb03019
]
bpr_I1637
Messenger RNA biogenesis [BR:
bpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bpr_I1637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Ribosomal_S18
Motif
Other DBs
NCBI-ProteinID:
ADL34374
UniProt:
E0RWK0
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All DBs
Position
1:complement(2007208..2008755)
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AA seq
515 aa
AA seq
DB search
MAGIIIAVVATLVISVLVTWVLSNSYHKKVTEGKIGSAEERARKIIDEALKNAEETKREK
LLEAKEEALKTRNELEKEVKDRRNEVQRSERRVQQKEENVEKRSEAIEKKEQSLNAREEA
LNKKSEEVAKLNEQRLQELEKISGLTSEQAKEYLLKIVEDDVKHESAVMIKNMEAEAKEE
ADKRAKEIVVNAIQRCSADHVSETTISVVQLPNDEMKGRIIGREGRNIRTLETMTGVDLI
IDDTPEAVVISGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVAAKIKEEGEN
AAIEAGVHGLHPEVIKILGRMKFRTSYGQNCLKHSVEVAQLCGLLASELGLDVRVAKRAG
LLHDIGKAVDHELEGSHIQLGVDICKKYKESQIVINAVEAHHGDVEPQSLIAVLVQAADT
ISSARPGARRETLETYTSRLKELEEITNSFKGVDHSFAIQAGREVRVMVVPEQVSDADMV
LMARDIAKKIEDEMEYPGQIKVNIIRESRATDYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccggtattattattgcagtagtagcaactcttgtcatttctgtacttgtaacttgg
gttttgtcaaactcataccataaaaaggtaactgaggggaaaatcggaagtgctgaggaa
agggcaagaaagattattgacgaagcactcaaaaatgctgaggagacaaagcgtgagaaa
cttttggaagccaaggaagaagcgttgaagacacgtaacgaattggagaaggaagttaag
gaccgtagaaatgaggttcagcgctcagagagaagagttcagcagaaagaggaaaacgtc
gagaagagatcggaagcgattgagaagaaagagcagagtcttaatgctcgtgaagaggcg
cttaacaagaagagtgaagaggttgctaagcttaatgaacaaaggctacaggaacttgag
aaaatctctggcttaacctccgaacaggcaaaagagtatcttttaaaaatcgttgaagat
gatgtaaagcacgaatcagctgtcatgatcaagaacatggaagctgaagcaaaagaggaa
gcagataagagagctaaggaaattgtagttaacgcaattcagcgttgttctgcagaccat
gtttccgagactactatatctgttgtccagctgccaaatgatgagatgaagggacgaatc
attggtagagaaggtaggaacattagaacacttgagacaatgactggtgttgatcttatc
attgatgatacaccagaagcagtagttatttccggctttgatcctatccgccgagaagtt
gcacgtatagctcttgagaagcttattgtagatggtcgtatccatccggcaagaatcgag
gaaatggttgagaaggcacagaaggaagtagctgccaagatcaaagaggaaggtgagaat
gctgctattgaggctggtgttcatggccttcatcctgaagtgatcaagattcttggtcgt
atgaaattcagaacaagctatggtcagaactgtttgaagcattctgtagaagttgcacag
ttgtgtggacttcttgcttctgagctgggccttgatgtaagagttgctaagagagcaggt
cttttacatgatattggtaaggctgttgaccatgagctcgagggctcacatattcagctt
ggtgttgatatttgtaagaagtacaaggaatctcagatcgttatcaacgcagtagaggct
catcacggtgatgttgagccacagtctcttatagctgttcttgtacaggctgctgataca
atttcatcagcaagacctggagctagaagagaaactcttgaaacttacacatccagatta
aaagaactcgaagaaattactaatagctttaagggtgttgatcactcatttgctattcag
gctggtcgagaagtcagagtaatggttgttcctgagcaggtttctgatgcagatatggtg
ctcatggctcgagatattgccaagaagattgaggacgagatggaatatcccggacagatc
aaggttaatattatcagagagagtagagcaacagattacgctaagtaa
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