Burkholderia pseudomallei 668: BURPS668_2642
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Entry
BURPS668_2642 CDS
T00481
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
bpd
Burkholderia pseudomallei 668
Brite
KEGG Orthology (KO) [BR:
bpd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BURPS668_2642 (hrpA)
Enzymes [BR:
bpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BURPS668_2642 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_23
NACHT
AAA_19
nSTAND3
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ABN84487
LinkDB
All DBs
Position
I:complement(2617251..2621378)
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AA seq
1375 aa
AA seq
DB search
MSNVPKSPAQKRAGTPGEPQPAGAAAPRPPRPRQAPPAQARAPRAERRDAGPEAARAPHA
PRTRCAPNPVPPITFAESLPVSGKRDEIARAIAAHPVVIVCGETGSGKTTQLPKICLALG
RGLGAGGAGLIGHTQPRRLAASSTGRRIAEELGTPFGEVVGYKVRFTDNLAPGASVKLMT
DGILLAETQTDPLLKAYDTLIIDEAHERSLNIDFLLGYLRQILPRRPDLKLIVTSATIDA
ERFARHFGSDERPAPVIEVSGRLYPVEVRYRPIADDRPAAVRHAEGASSGRDRAKSAREA
ERDLMDGIVDAVDELCREGPGDVLVFLPGEREIRDAAEALRKHHPPHTEILPLFARLSAA
EQERVFKASNARRIVLATNVAETSLTVPGIRYVVDTGLARVKRYSYRNKVEQLQIEPISQ
AAANQRAGRCGRVADGVCIRLYEESDFAGRARFTDPEILRSSLASVILRMKSLHLSAIES
FPFIEPPPGRAIADGYQLLNELGAVDDDNALTPLGRELARLPLDPRVGRMILAARDQQAL
REVLVIASALSVQDPRERPVDAQEQADQAHRRFADERSEFLQWLRIWAWFEEAVAHKKSN
RQLVDACRQHFLSHLRLREWRDVHSQLLTVVREHGWRLNEADATFEQIHLSLLTGLLGNI
GFKAEDEPHYLGARGIKFHLWPGSALVKKAGRWVMAAELVETSRLYARCIAKIEPEWIER
IGAHLLKKSLSEPHWEKRPAQVAAFERATLYGLTIYHRRRVAFGRQDPARARELFIRGAL
VDGEFDTKLAFFAHNRKLLADIEQLEHKSRRQDVLVDDELIHAFYDQAIPAGIHTGAAFE
RWYRDEVSKSGQPEDKLRLLYLSRDDLMRHEAAGVTTELFPKRVTMAGVEMALAYHFEPG
SPRDGVTLAVPLFALNQVDARRAEWLVPGMLREKAHLLLKSLPQKLRRHCVPLPEYAAGF
VERAGRERFGAGGLVDALIADVREQTQVATKTSDFKLETLPAHLFMNFKVIDEHGRQLAM
GRNLAQLRAELGAQAQQHFQKIAAAATLAPAGEPAAAAAGASGARARRVPLGAPPRAAEP
AAQAGAAAGATALYENLTTWNFGKLPELLEIRRRGETLFGYPALVDRGTHCDVEVFDSPD
EAARIHRAGLRRLFALQLKEPIKYLEKNLPGLREMAMQYMSLGTQDELRDQLIATALDRA
CLQEPLPADDASFHARRDEGRSRLNLLAQEIARLVGQILAEYAGLAKKLAQAKPFPAAHA
DMQGQLAALVGKRFVVDTPYAQLAHFPRYLKGIALRIDKLKADPARDARQAAELQPLAQH
YQRSVAQRGGVADARLAEFRWLLEELRISLFAQELRTPMPVSVKRLYKVWESMQR
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgtacctaaaagtcccgcgcaaaaacgtgcgggcacgccgggcgagccgcag
cccgccggcgccgctgcgccgcggccgccgcgcccccggcaggcgccgcccgcgcaggcg
cgcgcgccgcgcgccgagcgccgcgacgccggccccgaagccgcccgcgcgccgcatgcg
ccgcgcacgcggtgcgcgccgaatcccgttccgccgatcacgtttgccgaaagcctgccc
gtgtcgggcaagcgcgacgagatcgcgcgcgcgatcgccgctcacccggtcgtgatcgtc
tgcggcgagacgggctcgggcaagaccacccagttgccgaagatctgcctggcgctcggc
cgcggcctcggcgcgggcggcgcgggcctgatcggccacacgcagccgcgccggctcgcg
gcgtcgtcgacgggccgccggatcgccgaggagctcggcacgccgttcggcgaggtggtc
ggctacaaggtgcgcttcaccgacaacctcgccccgggcgcctcggtcaagctgatgacg
gacgggatcctgctcgccgagacgcagaccgacccgctgctgaaggcgtacgacaccctc
atcatcgacgaggcgcacgagcgcagcctgaacatcgatttcctgctcggctacctccgg
cagatcctgccgaggcggccggacctgaagctgatcgtcacgtcggcgacgatcgacgcc
gagcgcttcgcgcgccatttcggcagcgacgagcggcccgcgccggtgatcgaggtgagc
gggcggctgtatccggtcgaggtgcgctaccggccgatcgccgatgaccggccggccgcc
gtccggcacgcggaaggcgcgagctcgggccgcgatcgcgcgaagagcgcgcgcgaggcc
gagcgcgacctgatggacggcatcgtcgacgcggtcgacgagctgtgccgcgagggcccc
ggcgacgtgctcgtgttcctgcccggcgagcgcgagatccgcgacgcggccgaggcgctg
cgcaagcaccatccgccgcacaccgagatcctgccgctgttcgcgcggctgtccgcggcc
gagcaggagcgcgtgttcaaggcgtcgaacgcgcggcggatcgtgctcgcgacgaacgtc
gccgaaacgtcgctgaccgtgccgggcatccgctatgtcgtcgacacgggcttggcgcgc
gtgaagcgctattcgtaccggaacaaggtcgagcagttgcagatcgagccgatctcgcag
gcggccgcgaaccagcgcgcgggccgctgcggccgcgtcgccgacggcgtctgcatccgc
ctctacgaggaaagcgatttcgccggccgcgcacgcttcaccgatccggaaatcctgcgc
tcgtcgctcgcgtcggtgatcctgcggatgaaatcgctgcatctgtcggcgatcgaatcg
tttccgttcatcgagccgccgccgggccgcgcgatcgcggacggctatcagctgctcaac
gagctcggcgcggtcgacgacgacaacgcgctcacgccgctcggccgcgagctcgcgcgg
ctgccgctcgatccgcgcgtcggccggatgatcctcgccgcgcgcgaccagcaggcgctg
cgcgaagtgctcgtgatcgcgagcgcgctgtccgtgcaggacccgcgcgagcgcccggtc
gacgcgcaggagcaggccgaccaggcacaccggcgcttcgccgacgagcgctccgagttc
cttcagtggctgcggatctgggcgtggttcgaggaggcggtcgcgcacaagaagtcgaac
cggcaactcgtcgacgcgtgccggcagcatttcctgtcgcacctgcggctgcgcgaatgg
cgcgacgtccactcgcagctcctgaccgtcgtgcgcgagcacggctggcggctgaacgaa
gccgatgcgacgttcgagcagatccatctgtcgctgttgacgggcctgctcggcaacatc
ggcttcaaggccgaggacgagccgcactacctcggcgcgcgcggcatcaagttccatctg
tggccgggctccgcgctcgtgaagaaggcggggcgctgggtgatggcggccgagctcgtc
gagacgagccgcctctatgcgcgctgcatcgcgaagatcgagcccgaatggatcgagcgg
atcggcgcgcatctgctgaagaaatcgctgtccgagccgcactgggagaagcggcccgcg
caggtcgccgcgttcgagcgcgcgacgctgtacgggctcaccatctatcaccggcggcgc
gtcgcgttcggccggcaggacccggcgcgcgcgcgcgagctgttcatccgcggcgcgctc
gtcgacggcgaattcgacacgaagctcgcgttcttcgcgcacaaccgcaagctgctcgcc
gacatcgagcagctcgagcacaagtcgcgccgccaggacgtgctcgtcgacgacgagctg
attcacgcgttctacgatcaggcgattccggccggcattcacacgggcgccgcgttcgag
cgctggtatcgcgacgaggtgagcaagagcgggcagccggaagacaagctgcgcctgctg
tatctgtcgcgcgacgatctgatgcgccacgaggcggcgggcgtgacgaccgagctgttt
ccgaagcgcgtgacgatggcgggcgtcgagatggcgctcgcgtaccacttcgagccgggc
tcgccgcgcgacggcgtgacgctcgcggtgccgctcttcgcgctgaaccaggtcgacgcg
cgccgcgccgaatggctcgtgcccggcatgctcagggagaaggcgcatctgctgctgaaa
tcgctgccgcagaagctgcgccgccattgcgtgccgctgccggagtacgcggcgggcttc
gtcgagcgcgccgggcgcgagcgcttcggcgcgggcggcctcgtcgacgcgctgatcgcc
gacgttcgcgagcagacgcaggtcgcgacgaaaacgtccgatttcaagctggagacgctg
cccgcgcacctgttcatgaacttcaaggtgatcgacgagcacggccggcaactcgcgatg
gggcgcaatctcgcgcaactgcgcgcggaactgggcgcgcaggcgcagcagcacttccag
aagatcgccgccgcggcgacgctcgcgccggcgggcgagcccgccgcggcggccgccggc
gcgagcggcgcgcgggcacggcgcgtgccgctcggcgcgccgccgcgggcggccgagccg
gcggcgcaagcgggcgcggccgccggcgcgaccgcgctctacgagaacctgacgacgtgg
aacttcggcaagctgccggaactcctcgaaatccgccggcgcggcgagacgctgttcggc
tacccggcgctcgtcgatcgcggcacgcattgcgacgtcgaggtgttcgattcgcccgac
gaggcggcgcggatccaccgcgcgggcctgcggcgcctgttcgcgctgcaactgaaagag
ccgatcaagtatctggagaagaacctgccggggctgcgcgagatggcgatgcagtacatg
tcgctcggcacgcaggacgagctgcgcgaccagctgatcgcgaccgcgctcgaccgcgcg
tgcctgcaggaaccgctgcccgccgacgacgcgagcttccacgcgcgccgcgacgagggc
aggagccgcctgaatctgctcgcgcaggagatcgcgcggctcgtcgggcagatcctcgcc
gagtacgcggggctcgcgaagaagctcgcgcaggccaagccgttcccggccgcgcacgcg
gacatgcagggccagctcgccgcgctcgtcggcaagcgcttcgtcgtcgatacgccttac
gcgcagcttgcgcacttcccgcgctacctgaagggaatcgcgctgcgcatcgacaagctg
aaggccgatcccgcgcgcgacgcgcggcaggcggccgagctgcagccgctcgcgcagcat
tatcagcgctcggttgcgcagcgcggcggcgtcgcggacgcgcggctcgccgaattccgc
tggctgctcgaggagctgcggatctcgcttttcgcgcaggagctgcgcacgccgatgccg
gtatcggtcaagcggctctacaaagtgtgggagtcgatgcagcgctga
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