Alkalihalophilus pseudofirmus: BpOF4_03495
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Entry
BpOF4_03495 CDS
T01165
Name
(GenBank) CMP-binding protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bpf
Alkalihalophilus pseudofirmus
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpf03019
]
BpOF4_03495
Messenger RNA biogenesis [BR:
bpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BpOF4_03495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
NifQ
Motif
Other DBs
NCBI-ProteinID:
ADC48765
UniProt:
D3FX10
LinkDB
All DBs
Position
complement(2971277..2972215)
Genome browser
AA seq
312 aa
AA seq
DB search
MGLFSKANEGEKFTNFFLIRERELKQASNGSEYATFLLERNLEIIPAQLWDLTKEQKESL
QPKALIKGEGIVTTFKQKKLLKLLRVRLATSDDPVSISELISRKGISREELWQELRMLME
EVTSPILRNILRRVYSERTIREKLTTLPASKTYHHAYYAGLMHHIVELSRAAYQLLPLYP
YVNRDLVLSACLLGDIGKTKALRDVVAPEYTSSGELMGHMVLGIEMINEAAREAGISTDD
VEVIALKHLMLSQNGDVEKGYGSAVSEKTAEAVMLASIKEMNTKLHAIEMIRERSEEEWV
YSPMFKRKMHHS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgggattgttttcaaaagcaaatgaaggagagaagtttacaaacttctttttaattcgt
gaaagagagttaaaacaggcttctaatggaagtgaatatgcaacctttcttttagaacgt
aacttagagattatccctgctcaattatgggaccttacgaaagagcaaaaagaatctttg
cagcccaaagcattaattaaaggagaagggattgtcactacctttaagcaaaagaagtta
ttaaagctattaagagttagattagcaacatcagacgacccagtatccattagtgaactg
atttctagaaaaggaatatctagagaagagctatggcaagagctgcgtatgttgatggag
gaagttacctctcccattttacgaaatattttacgtcgggtttattctgaacgtaccatt
cgggaaaaactaacgactctccctgcctctaaaacatatcatcatgcctactatgctggc
ctcatgcatcatattgtagagctatctagagcggcatatcagctcctgcctctctatcct
tatgtcaatcgagatttagtgttatcagcatgcttgttaggggacatcggaaaaacgaag
gcgctgcgggatgtagtagcgccagagtatacatcaagcggagaattaatgggacatatg
gtgcttggaattgaaatgattaatgaagcagcgagagaagcagggatttcgaccgatgat
gtggaagttattgcattgaaacatcttatgctcagtcagaacggggatgtagaaaaagga
tatgggagcgctgtatcggaaaaaacggcagaagcagtcatgctggcatctataaaagaa
atgaatacaaaacttcatgccattgaaatgatccgtgaacgaagtgaagaagaatgggtg
tattctccaatgtttaaacgtaagatgcaccattcatga
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