Brachyspira pilosicoli B2904: B2904_orf784
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Entry
B2904_orf784 CDS
T02225
Name
(GenBank) putative DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bpj
Brachyspira pilosicoli B2904
Pathway
bpj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B2904_orf784
09124 Replication and repair
03420 Nucleotide excision repair
B2904_orf784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpj03021
]
B2904_orf784
03400 DNA repair and recombination proteins [BR:
bpj03400
]
B2904_orf784
Enzymes [BR:
bpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2904_orf784
Transcription machinery [BR:
bpj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
B2904_orf784
DNA repair and recombination proteins [BR:
bpj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
B2904_orf784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AFR70129
UniProt:
J9US77
LinkDB
All DBs
Position
793218..794915
Genome browser
AA seq
565 aa
AA seq
DB search
MNNNAPIIVQGDGTILLDVSTEHFEEIRNFLLVFAELVKSPEYIHTYRITLVSLWNAASL
NYTAQSIIDFLKKYSSYDIPKNIVKQIESSISKYGRIKIIKEDDDKYYLVSDDESIIEEV
LHYKAMVKYIKREVNDNKIEIDPIYRGHIKLALINIGYPVEDLAGYKTGEEYHFNLRNKL
LSNGEDFSLREYQLNAIEAFYANGRPEGGAGVIALPCGTGKTVVGIAAMSKMQTKTLIIV
TGVTACRQWRDEILDKTDIPKEDIGEYNGLNKEIKPITIATYKILTYRKDKESPFVHFEL
FFKHNWGLIIYDEVHLLPAPIIKLTSEIQSMRRLGLTATLVREDGLEKDVFCLIGPKKFD
MPWRELEEKKFIAEAYCYDLRIPLDNEQRADYVVSSDKVKFRIASENILKYEIVKKIIKK
LEGKNILIIGQYLNQLNEMKRQTGYTIITGKTPQAERDEIYKKFKSGEIKILIVSKVANL
AVDLPDANVLIQISGTFGSRQEEAQRLGRVLRPKKGENKSYFFSVITSDTKEEDFSHKRQ
LFLTEQGYHYELLDMASFEELTFSK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttgaataataatgctcctatcatagttcagggcgatggtactattttattagatgtaagt
acagagcattttgaagaaataagaaattttttgcttgtatttgcagagcttgtaaagagt
cctgaatatattcatacatatagaattacattagtatcattatggaatgctgctagtttg
aattatacagctcagtctataatagattttttaaagaaatattcttcttatgatatacca
aaaaacattgtaaaacaaatagaaagcagtatatcaaaatacggaagaataaagattatt
aaagaagatgatgataaatattatcttgtaagcgatgatgaaagcattatagaagaagta
ttgcattataaggcaatggtaaaatatattaaaagagaagttaatgacaataaaatagag
atagacccaatttacagaggtcatataaaattagctcttataaatataggctaccctgta
gaagatttagctggttataaaacaggagaagagtatcattttaatttaagaaacaagctt
ttatctaatggtgaagatttttctttgagagagtatcaattaaatgcgatagaagctttt
tatgcaaatgggcgtcctgagggcggtgctggtgttatagctttgccttgcggtactggt
aaaactgttgtaggaatagctgctatgagcaagatgcagacaaaaactcttataatagtt
acaggggttacagcttgcagacagtggagagatgagatattagataaaacagatatacca
aaagaagatattggcgagtataatggactcaacaaagaaataaaacctataacaatagct
acatacaaaatacttacatatagaaaagacaaagaatctccttttgtgcattttgaatta
ttttttaagcataattgggggcttataatatatgatgaggttcatttgcttcctgctcct
ataataaagcttacaagtgagattcagagtatgagaaggcttgggcttactgctactttg
gtgcgtgaggacgggcttgaaaaagatgtattttgtcttattgggcctaagaagtttgat
atgccttggagggagcttgaagagaagaagtttattgctgaggcttattgttatgatttg
agaataccgcttgataatgaacagagggctgactatgtggtttctagcgataaagtgaag
tttagaattgcaagcgaaaatatacttaaatacgaaatagttaaaaaaatcattaaaaaa
ctagaaggtaaaaacatactaattatagggcagtatttaaatcagcttaatgagatgaaa
agacaaacaggatatacaatcattacaggtaaaactcctcaagctgaaagagatgagatt
tataaaaagtttaagtctggtgaaataaaaatacttatagtaagtaaagtagctaatttg
gcagttgatttgcctgatgctaatgtattaatacagatatctggtacttttggttctaga
caggaagaagctcaaagattaggccgtgttcttcgtccgaaaaaaggtgaaaataaaagc
tatttcttttcggttattacaagcgatacaaaagaagaagatttctctcataaaagacaa
ttatttcttacagagcagggatatcattatgagcttttggatatggcttcttttgaagag
cttactttttcaaaataa
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