KEGG   Burkholderia pseudomallei NCTC 13179: BBK_6114
Entry
BBK_6114          CDS       T02894                                 
Name
(GenBank) sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bpk  Burkholderia pseudomallei NCTC 13179
Pathway
bpk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bpk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BBK_6114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpk03021]
    BBK_6114
Transcription machinery [BR:bpk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BBK_6114
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_7 HTH_29 GerE HTH_Tnp_ISL3 HTH_40 HTH_20 HTH_24 DnaG_DnaB_bind HTH_11 TnsD
Other DBs
NCBI-ProteinID: AGZ31875
LinkDB
Position
2:complement(3239828..3240337)
AA seq 169 aa
MPANTLRLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEP
RAFLTTVAQRVLYNHWRRERLERAYLDALAQWPEAVAPSPETRAVLFETLVEVDRMLDGL
PAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgccggccaacactttgcgtctgcagcgggagatcgctgcgctctataccggtcatcgc
ggctggctgcacggctggctgtcgaagaagctcggctgcggcgagcgcgcggccgatctg
gttcacgacacgttcatccgcctgctcgcacgcgacgagccgatcgacgcggccgagccg
cgcgcgttcctgacgaccgtcgcgcagcgcgtgctgtacaaccactggcggcgcgagcgg
ctcgagcgcgcgtatctcgacgcgctcgcgcaatggccggaggcggtcgcgccgtcgccg
gagacacgcgccgtcctgttcgagacgctcgtcgaggtcgaccggatgctcgacgggctg
cccgccgtcgttcgccgcgcgttcctgctcgcgcagctcgacggcatgacgcacgcgcag
atcgcggccgagctgcgcgtgtcgctcgcgaccgtcaagcgctacctggtgaaagcgggc
gcgcagtgctacttcgcgatcgccgcatga

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