Burkholderia pseudomallei BPC006: BPC006_I1739
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Entry
BPC006_I1739 CDS
T02301
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03420
Nucleotide excision repair
bpq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BPC006_I1739
03430 Mismatch repair
BPC006_I1739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpq03400
]
BPC006_I1739
Enzymes [BR:
bpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BPC006_I1739
DNA repair and recombination proteins [BR:
bpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPC006_I1739
MMR (mismatch excision repair)
Other MMR factors
BPC006_I1739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AFR15615
LinkDB
All DBs
Position
I:1681622..1683985
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AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIRQGYAAPATVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPEKVDATDSFNRKFVELYQAYEQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGGHNAI
FAVGDDDQSIYAFRGANVGNMRDFEHEFRVRNLIKLEQNYRSHGNILDAANHLIANNAHR
LGKNLRTDAGHGEPVRVYEAATDAQEAAWIVEEIRSLVNAGLARSEVAVLYRSNAQSRSI
EHTLMTAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYDCSMAAAIPYVAGKAGSSLASFANLIAKMRAETARMSLPETVEHVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDTPARSIPLHARASAAPELAAGGA
DPADAVLAPANLADPAQNPDAMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSALESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQHVLKWLTPKVEAGARWGGRSDNAGWGRDWFARPGGGARQGVVDAAVSA
PLPAFANQQREAQNGLRIGQQVFHTKFGEGTVTALEGSGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgcgaacctgaaccccgaacaactcgccgccgtcacgttgccgaac
gagccggcgctgatcctcgccggggcgggcagcggcaagacccgcgtgctcatcacgcgg
atcgcgtggctgatccggcaaggctatgcggcgcccgccaccgtgctcgccgtcacgttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtccgcgatgatgccgatcgacacg
cgcggcatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcgcgcactac
cgcgacgcggggctgccgcagacgttccagatcctcgataccgccgaccagctctccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaagtacccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgccccgagaaggtcgacgcgacc
gacagcttcaaccgcaagttcgtcgagctgtaccaggcgtacgagcagcagtgccagcgc
gagggcgtcgtcgatttccccgagctgctgttgcgctgctacgagttgctcgcgcacaac
ccgccgctgcgcgcgcactaccaggcgcgcttcaagcacatcctcgtcgacgagttccag
gatacgaacaagctgcagtacgcgtggctcaagctcctcgcgggcggccacaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctatgcgtttcgcggcgcgaacgtcggcaac
atgcgcgatttcgagcacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cgctcgcacggcaacatcctcgacgcggcgaaccacctgatcgcgaacaacgcgcaccgg
ctcggcaagaacctgcgcaccgacgcgggccacggcgagcccgtgcgcgtgtacgaagcg
gccaccgacgcgcaggaagcggcgtggatcgtcgaggagatccgctcgctcgtgaacgcg
gggctcgcgcgcagcgaggtggcggtgctgtaccggagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgacggcgggcatcgcgtaccgcgtctacggcggcctgcgcttcttc
gagcgccaggaggtgaagcacgcgctcgcgtatctgcgcctcatcgacaatccgaacgac
gacaccgcgttcgcgcgcgtcgtcaactttccgacgcgcggcatcggcgcgcgctcgatc
gagcagctcgccgacgcggcgcgcctgtacgactgctcgatggcggccgcgattccgtac
gtggcgggcaaggcgggctcgagcctggcgtcgttcgcgaacctgatcgcgaagatgcgc
gcggagaccgcgcggatgagcctgcccgagacggtcgagcacgtcgtgcgcgcgagcggc
ctcgccgatttctaccagggcgagcgcgaagggcaggatcgcctcgagaacctgcaggaa
ctggtgaacgcggccaccgcgttcgtctccgaggagggctacgggctcgacacgcccgcg
cgctcgattccgctgcatgcgcgcgcgagcgcggcgccggagctcgccgcgggcggcgcc
gatccggccgacgcggtgctcgcgcccgcgaacctcgccgatcccgcgcagaacccggac
gcgatgacgccgctcgccggcttcctgtcgcacgcgtcgctggaggcgggcgacaaccag
gcgcaggcgggccaggacgcggtgcaactgatgacggtccacgcggcgaaggggctcgag
ttcaccgcggtgttcatcaccgggctcgaggaagggctcttcccgcacgagaacagcgcg
ctcgaatccgacggcctcgaagaggaacgccggttgatgtacgtcgcgatcacgcgcgcc
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacccgctac
aacatccgctcgcgctttttcgacgagctgccgcagcacgtgctcaagtggctcacgccg
aaggtcgaggcgggcgcccgctggggcggccgctcggacaacgccggctggggccgcgac
tggttcgcgcggccgggcggcggcgcgcggcagggcgtggtcgacgcggcggtgtccgcg
ccgctgcccgcgttcgcgaaccagcagcgcgaggcgcagaacggcttgcggatcggccag
caggtgttccacacgaagttcggcgaaggcacggtgacggcgctcgaaggcagcggcacc
gacgcgaaggcgcaagtcaaattcaagcggcacggcgagaagtggctcgcgctcgcggtc
gcgaaactgcaggcggtcgaatga
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