Burkholderia pseudomallei BPC006: BPC006_I2564
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Entry
BPC006_I2564 CDS
T02301
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpq
Burkholderia pseudomallei BPC006
Pathway
bpq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPC006_I2564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpq03400
]
BPC006_I2564
Enzymes [BR:
bpq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BPC006_I2564
DNA repair and recombination proteins [BR:
bpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BPC006_I2564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFR16431
LinkDB
All DBs
Position
I:complement(2507490..2508857)
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AA seq
455 aa
AA seq
DB search
MAWTEAALEELGLAPAWVRRDAARAVDVNEAAAHAAGEAAVAAVGRGAQPASPDAPREPA
RRIARDGGRDGGQDGASGDAGSASPNDAAHAMARVAGAEASAAAAVADERAALARQAGDG
RGQARQAAAESGVRAAADAPAPAAAPESRTRDATIARGASPAEPDEPGVAGVVGVADEPS
VAGGARRARTSGGGAEVPASALDLTDAAEATRPAAAPAPAALTGGDAGAAASDEDMSWFD
LEPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHAD
WMLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEP
DEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMRGRVHQYEGVPVIVTYH
PAYLLRSLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
gacgcggcgcgcgctgtggacgtgaacgaggcggccgcgcacgcggccggagaagccgcg
gtcgcggcggttgggcgaggagcgcagccggcgtcgccggatgcgccgcgcgagccggcg
cgtcggatcgcgcgcgatggtgggcgcgacggcgggcaagacggcgcgagtggcgacgcg
ggatcggcgtcgccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcg
agcgcagccgccgccgtcgccgacgaacgcgcggcgcttgcgcggcaggccggcgacggg
cgcggacaggcgcggcaagcggcggccgaatccggcgtgcgggcggcggcggatgcgccc
gcgccggccgcggcgcccgaatcgcgaacgcgggatgcgacgattgcgcgcggggcttcg
ccggctgagccggacgagccgggcgtggcaggcgtggtgggcgtggcggacgagccgagc
gtggcgggcggcgcacgccgcgcgcggacgagtggcggcggcgcggaggtgccggcgagc
gcgcttgacttgacggatgcggccgaggcaacgcgtccggcggcggcgcccgcgccggcc
gcgctcaccggtggcgatgccggcgcggcggcgtccgacgaggacatgtcgtggttcgat
ctcgaaccggtgcacgagcccgcgctgccggacgttgccgcacggcccgccgccactacg
ccgtccgtcgccgagctcggctgggacgaactgcgcgcgcgcgtcgccgactgcgcgcgc
tgccgcctctgcgaaaagcgcacgaacacggtgttcggtgtcggtgacgagcacgccgac
tggatgctcgtcggcgaggcgcccggcgagaacgaggacaagcaaggcgagccgttcgtc
ggccaggcgggcaagctgctcgacaacatgctgcgcgcgctggcgctcaagcgcggcgag
aatgtctacatcgcgaacgtgatcaagtgccggccgcccggcaaccgcaatccggagccc
gacgaggtcgcgcgctgcgagccgtatctgcagcggcaggtcgcgctcgtgaagccgaag
ctgatcgtcgcgctcggccgcttcgccgcgcagacgctgctcaagacggacggaagcatc
gcttcgatgcgcgggcgcgtgcatcagtacgaaggcgtgcccgtgatcgtcacgtaccat
ccggcgtatctgctgcgcagcctgcaggacaaggcgaaggcctggtccgatctgtgtttg
gcgaacgatacctaccggagtgccgcgcccgccgccgatccgccatga
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