KEGG   Butyrate-producing bacterium SS3/4: CK3_03440
Entry
CK3_03440         CDS       T02611                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
bprs  Butyrate-producing bacterium SS3/4
Pathway
bprs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bprs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CK3_03440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bprs03400]
    CK3_03440
DNA repair and recombination proteins [BR:bprs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CK3_03440
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CK3_03440
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_29 AAA_16 nSTAND1 RsgA_GTPase AAA_23 AAA_22 AAA_25 AAA_33 NACHT DnaJ_CXXCXGXG cobW Viral_helicase1 BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: CBL40192
UniProt: D7GQW7
LinkDB
Position
356733..359582
AA seq 949 aa
MPKQYIKIRGANEHNLKNISLDIPRNELVVLTGLSGSGKSSLAFDTIYAEGQRRYMESLS
SYARQFLGQMEKPDVESIEGLSPAISIDQKSTNRNPRSTVGTVTEIYDYMRLLYARIGIP
HCPKCGREIRKQTVDQMVDQIMTLPERTKIQLLAPMVRGRKGRHEKVLEQAKRSGYVRVM
IDGNLHELSEEITLEKNIKHNIEIVVDRLVVKPGIEKRLTDSIETVMKLSDGLMIVDVTG
GEPINFSQSFSCPDCGISIEEVEPRSFSFNNPFGACPDCFGLGYKMKFDEDLMIPDKSLS
INEGAIVVLGWQSCAKPGSFSRAILDALAAEYHFDLDTPFKDYPKEIHDILIYGTGGKEV
KVHYTGQRGTGVYDVAFEGLIENVNRRYRETFSQASKAEYESFMRITPCTTCHGQRLKQS
SLAVTVGGLNIYEATNMSIVKFREFIDDLKLSEMQKMIGEQILKEIRARISFLIDVGLDY
LSLSRATGTLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQRDNDKLLKTLEHLRDL
GNSVIVVEHDEDTMRAADCIVDIGPGAGEHGGNVVAVGTAAQIMKCKESITGAYLSGRIK
IPVPKERRSPTGWIKIRGARENNLKNIDVDVPLGIMTCVTGVSGSGKSSLINEILYKALA
KKLNRARTIPGDHDGIDGVEQLDKIIAIDQSPIGRTPRSNPATYTGVFDLIRDLFAATTD
AKAKGYSKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCGGKRYNRETLEVKY
KGKSIYDVLNMTVEEALKFFENVPSIARKIATLNDVGLSYIRLGQPSTELSGGEAQRIKL
ATELSRRGTGKTIYILDEPTTGLHFADVHKLVEILRKLSEGGNTVVVIEHNLDVIKTADY
IIDMGPEGGDRGGTVIAKGTPEEIVKVPESYTGQYVKRYLENGDAGSDE
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgccgaagcaatatataaaaatacgaggtgccaacgagcacaacttaaaaaatatttcc
ctggatatcccaagaaatgagctggtggtcctgaccggactttccggatcgggaaaatcc
tccctggcatttgatacgatctacgcggagggacagagacgctatatggagtctctgtcc
tcctatgcgcgtcagttcttaggccagatggaaaagccggatgttgagagcatcgaggga
ctttccccggcgatctccatcgaccagaaatccacgaaccgcaacccgcgttccactgtg
ggaaccgtgacggagatctacgactatatgcgtcttctgtacgcgaggatcggtatcccc
cactgcccgaagtgcggcagggagatccggaaacagaccgtggaccagatggtggaccag
atcatgacattgccggagcggacgaaaatccagcttttagcgccaatggtccgtggaaga
aaaggacgtcatgagaaggttctggaacaggcgaaacgcagcggttacgtccgtgtgatg
atcgacggaaatctacatgagctgtcagaagaaatcacgctggagaagaatatcaagcac
aatatcgagatcgttgtggaccgtctcgttgtgaagcctgggatcgagaaacgtctgacg
gactccatcgagactgtgatgaagctgtctgatggtctgatgatcgtggacgtgacgggc
ggcgagccgatcaacttcagccagagcttttcctgcccggactgcgggatcagcatcgag
gaggtggagccgcgaagcttctccttcaataacccgttcggcgcctgcccggactgtttc
ggtctgggatataagatgaaatttgatgaagatctgatgatcccggataagtccttgagt
atcaatgagggagcaatcgtcgttctcggctggcagtcctgcgcgaagccgggaagcttt
tcaagggcgatcttagatgccctggcggcagagtatcactttgatcttgatactccgttc
aaagattatccgaaggagatccatgatatcctgatctacggaaccggcggaaaggaagta
aaggtccactatacaggacagaggggaaccggtgtttatgacgtggcctttgagggtctg
atcgagaacgtaaaccgccgttaccgggagacattctcccaggccagcaaggcagagtac
gagagctttatgcggatcacaccgtgtaccacctgtcatggacagcgcttaaagcagtct
tctctggcggtgacagtaggtggactgaatatttacgaagctacgaatatgtccatcgta
aaattcagggagtttatcgatgatctgaagctatccgagatgcagaagatgatcggtgaa
cagattttaaaggaaatccgggcgaggatcagcttcctgatcgacgtgggactggattat
ctgtccttatcccgggcgaccggtaccctttccggcggcgaggcacagcggatccgtctg
gcgacccagatcggctccggacttgtgggggttgcctatatcctcgatgagccgagtatc
ggactgcaccagagagataacgataagctgttgaaaactctggaacacctgcgggatctc
ggaaacagtgtgatcgtcgtggaacacgatgaggatacgatgcgggcggcagactgtatc
gtggatatcggtccgggggccggggaacacggtggaaatgtggtcgctgtgggaacggca
gcccagatcatgaagtgtaaagaatcgatcaccggtgcgtatttgagcggacggatcaaa
attccggtgccgaaggagagaagaagcccaacgggctggatcaaaatccgcggcgcgagg
gagaataacctgaaaaatatcgatgtggatgtgccacttggaattatgacctgcgtgacc
ggtgtgtcgggatcgggaaagagctccctgatcaacgagatcctctataaggcgctggcg
aaaaagctgaaccgtgcccggacgatcccgggagatcacgacggaatcgatggtgtggaa
cagctggataagatcatcgccatcgaccagtccccgatcggaagaacgccgagatcaaac
ccggcgacctacactggtgtgtttgacctgatccgtgatctttttgcagcgaccaccgat
gcgaaggcgaagggatactcaaagggacggttcagcttcaacgtgaagggcggtcgatgc
gaggcctgcagcggtgacggaatcatcaagatcgaaatgcatttccttccggatgtctat
gtgccctgcgaggtctgcggcggaaagcggtacaaccgtgagactctggaagtgaagtat
aagggaaagagcatttacgatgtgctgaatatgaccgtggaggaggcgctaaagttcttt
gagaatgtgccgtctatcgcgagaaagattgcgacattgaacgatgtgggactttcctat
atccgtctcggacagccctcaacggagctttccggcggcgaggcgcagcggatcaagctc
gccacagagctttccagacgcggaaccggaaaaacgatctatattcttgatgagccgacg
acaggactccactttgcggatgtccataagctggtggagatcttaagaaagctttccgaa
ggtggaaatacggtggttgtgatcgagcacaatctggatgtgatcaagaccgcggattat
attatcgacatgggaccggaaggcggagaccgcggcggtaccgtgatcgcgaaaggaaca
ccggaggagatcgtgaaggttccggagtcctatacggggcagtatgtcaagcggtatctt
gagaacggagatgccggttcagacgagtaa

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