Burkholderia pseudomallei MSHR520: BBX_1978
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Entry
BBX_1978 CDS
T03163
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpsd
Burkholderia pseudomallei MSHR520
Pathway
bpsd03030
DNA replication
bpsd03430
Mismatch repair
bpsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBX_1978 (dnaX)
03430 Mismatch repair
BBX_1978 (dnaX)
03440 Homologous recombination
BBX_1978 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsd03032
]
BBX_1978 (dnaX)
03400 DNA repair and recombination proteins [BR:
bpsd03400
]
BBX_1978 (dnaX)
Enzymes [BR:
bpsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBX_1978 (dnaX)
DNA replication proteins [BR:
bpsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBX_1978 (dnaX)
DNA repair and recombination proteins [BR:
bpsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBX_1978 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_14
AAA_16
AAA_5
TsaE
AAA_18
Mg_chelatase
AAA_2
AAA_assoc_2
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHK66965
LinkDB
All DBs
Position
1:2163264..2164892
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AA seq
542 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGM
LGTLDQTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPA
SVLDEWPEAADLRRFAELLSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFEP
ATTGGGAPAGGVPARVAGAAPKSGARAAAAVGASAMPAVTGATGATGATGATGATGATGA
ALAPKAAAARAATRAEAPPAAPARPATAERGDDASDGDAPVPAKANARASADSRCDERDA
QPPADSGSVSGAASSAPPDTAFESAPRAAAPSAATPAAVPDARAPAAASAQDAVKGGRAR
LA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtttgcatcacgcc
tatctattcacgggcacgcgcggcgtcggcaagacgacgctgtcgcgcatcttcgcgaaa
gcgctcaattgcgagacgggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgtcgc
gaaatcgatgaagggcgcttcgtcgactatgtcgaaatggatgccgcgagcaatcgcggc
gtcgacgaaatggccgcgctgctcgagcgcgcggtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccatgcgttcaacgcgatgctc
aagacgctcgaagagccgccgccgcacgtcaagttcatcctcgcgaccaccgatccgcag
aagattcccgtcaccgtgctgtcgcgctgcctgcagttcaatctgaagcagatgccggcc
gggcacatcgtgtcgcatctcgagcggattctcggtgaagagcgcatcgcgttcgagccg
caagcgctgcgtcttctcgcgcgcgcggcgcagggcagcatgcgcgatgcgctgtcgctg
accgatcaggcgatcgcgtattcggcgaacgaagtgacggaaaccgccgtgtccggcatg
ctcggcacgctcgaccagacctatatggtgcggctgctcgatgcgctcgccgcggccgac
ggcccgcagattctcgccgtggccgacgagatggcgctgcgcagcctgtcgttctcggcc
gcgctgcaggatctcgcgagcctgctgcaccggatcgcatgggcgcagttcgcgccggcg
tcagtgctcgacgaatggccggaggcggccgatctgcgccgcttcgccgaactgctgagc
ccggagcaggtgcaactctattatcagatcgcgacggtcgggcgcggcgagctcgggctc
gcgcccgacgaatacgcgggcttcacgatgacgctgttgcgcatgctcgcgttcgagccg
gcgacgacgggcggcggcgcgccggcaggcggggtgcctgctcgggtggcgggcgccgcg
ccgaagtcgggcgcgcgtgctgctgcggcggtcggcgcgtcggcgatgcccgcagttact
ggagctactggagctactggagctactggggctactggggctactggggctactggggcg
gcgcttgcgccgaaggcggctgccgctcgtgcggcaacgcgcgccgaggcgccgccggcc
gcgccggcgcggccggcgacggcggaacggggcgacgacgcatccgacggcgacgcgccg
gtgcccgcgaaggcgaacgcacgcgcatcggccgactcgcgttgcgacgaacgcgacgcg
cagccgcccgccgattcgggcagcgtgtcgggcgcggcatcgagtgcgccgccggacacc
gcgttcgaatccgcgccgcgagcggccgcgccgtccgctgcgacgcccgccgccgtgccc
gatgcgcgcgcgccggccgccgcctcggcccaagatgctgtcaaaggcggccgcgcccgc
ctcgcctga
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