Burkholderia pseudomallei A79A: X996_3397
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Entry
X996_3397 CDS
T03498
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
bpso
Burkholderia pseudomallei A79A
Pathway
bpso00550
Peptidoglycan biosynthesis
bpso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
X996_3397 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bpso01002
]
X996_3397 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpso01011
]
X996_3397 (dacB)
Enzymes [BR:
bpso01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
X996_3397 (dacB)
Peptidases and inhibitors [BR:
bpso01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
X996_3397 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bpso01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
X996_3397 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AIV96471
LinkDB
All DBs
Position
1:3917506..3918870
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AA seq
454 aa
AA seq
DB search
MSAARNVLPASVLVALQRARVPASSLSVVVERIGDRTPVVAWNASRPMQPASTMKLVTTY
AGLSLLGADYRWRTSAYADGDVDENGTLHGTLYIKGTGDPKLVPEELIDLVNKIRRAGIV
NVDGALVLDKTFFAPQTRDLPPLDDDASAPYNVGPDPLLYAFKALSFTVTPTDSGAIAVD
VVPALANLNVDNRLVEGQGSCDAARPTLVTDANGELTASFAGDYPPSCGPTTTNLAVLNH
STFFARGFLALWRQTGGSFSGTIAEGKVPGRARPVASHHGPVLSSVVHDINKFSNNVMAR
NLFLTIGAVEHRPPATPAQSADTIRAFLAHSGLPTDGLALENGSGLSRDERVSALGLADM
LQAANASPVAQAFVDSLPIAGVDGTMRNRLTNAPVGGNAHIKTGTLRDVRAIAGYVASAD
GSSYVVVSFINDDRASAARAAHDALLEWVYEGPR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccgcgcgcaacgtgctgcccgcctcggtgctcgtcgcgctgcagcgcgcgcgc
gtgccggcgtcgagcctgagcgtcgtcgtcgagcggatcggcgatcgcacgcccgtcgtc
gcatggaacgcgagccggccgatgcagcccgcctcgacgatgaagctcgtgaccacctac
gcggggctgtcgctgctcggcgccgattatcgctggcgtacgagcgcgtacgccgacggc
gacgtcgacgagaacggcacgctgcacggcacgctgtacatcaagggcaccggagacccg
aagctcgtgccggaggaactgatcgacctcgtcaacaagatccgccgcgcgggaatcgtc
aacgtcgacggcgcgctcgtgctcgacaagaccttcttcgcgccgcagacgcgcgacctg
ccgccgctcgacgacgacgcgagcgccccgtacaacgtcggccccgacccgctgctctac
gcgttcaaggcgctgtcgtttacggtgacgccgaccgacagcggcgcgatcgcagtcgac
gtcgtgccggcgctcgcgaacctgaacgtcgacaaccggctcgtcgagggacagggctcg
tgcgacgcggcgcgcccgacgctcgtgaccgatgcgaacggcgagctcaccgcgtcgttc
gcgggcgactatccgccgagctgcggcccgacgacgaccaatctcgcggtgctgaaccat
tccacgttcttcgcgcgcggctttctcgcgctgtggcggcagacgggcggctcgttctcg
ggaacgatcgccgagggcaaggtgccgggccgcgcgcggcccgttgcgtcgcaccacggc
ccggtgctgtcgagcgtcgtgcacgacatcaacaagttcagcaacaacgtgatggcgcgc
aacctgttcctcacgatcggcgcggtcgagcaccggccgcccgcgacgcccgcgcagtcg
gccgacacgatccgcgcgttcctcgcgcacagcgggctgcccaccgacgggctcgcgctc
gagaacggctcggggctgtcgcgcgacgagcgcgtgagcgcgctcgggctcgccgacatg
ctgcaggcggccaacgcgagccccgtcgcgcaggcgttcgtcgattcgctgccgatcgcg
ggtgtcgacggcacgatgcggaaccggctgacgaacgcacccgtcggcggcaacgcgcac
atcaagacgggcacgctgcgcgacgtgcgcgcgatcgcgggctacgtcgcatcggcggac
ggctcgagctatgtcgtcgtcagcttcatcaacgacgatcgcgcgtcggccgcgcgcgcg
gcgcacgacgcgctgctcgaatgggtgtacgaagggccacgctga
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