Bifidobacterium pseudolongum: AH67_04650
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Entry
AH67_04650 CDS
T03529
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
bpsp
Bifidobacterium pseudolongum
Pathway
bpsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AH67_04650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsp03400
]
AH67_04650
DNA repair and recombination proteins [BR:
bpsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AH67_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
HHH_2
GIY-YIG
HHH
UPF0758_N
HHH_3
DUF4124
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AIZ16301
UniProt:
A0A0A7I8A8
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All DBs
Position
complement(1035864..1038206)
Genome browser
AA seq
780 aa
AA seq
DB search
MSVFERHAPDSWQDMAHDLIASMPAQDTSGGTNANGAPLLGDTRDLFRPRTGDIPAQPGV
YKWRDGEGRVIYVGKAKNLRNRLTNYFQPLHQLHPRTQTMVLTARSLEWTVVGTELEALT
LEYTWIKEFDPRFNVVFRDDKTYPYLAVSVGEEYPRVWVTRSRKRRDTRYFGPYAKVWDL
RKSLDRLLRTFPVRTCAPAVFRKARLTGRPCLLASIGKCSAPCVGRIEASAHRRMCEQLV
GVLTGRVGKSYIAQLTAQMKEASADLDFERAARLRDDIQMLGTVMEQNAVVLDQDVDADV
FGFATDELEASVHAFFVRSGTIRGERNWSVERADEVDDGELMADLIVQVYSELTHEAAST
PRADAPEDGGAAQGASQSLIINEQRNAIADSQQITATDATARAQATRARTRRMEQTGRAD
LLEPVAPVPRQILLPFAPARADELEQWLSGLRGGAVSITVPMRGNKKQLLDRADQNAQQA
LQRSKMSRISDIGTRTAAMNDVAQALGLDQAPLRIECYDISNTVGGAFQVASMVVFEDGI
AKKSEYRRFAIRGDDGTGALDDLSALYETLTRRFKHGNIAGDSGESLDNERRAGGQPADE
DVVRQNTNRRHFAYKPNLVVVDGGKPQVMAAAQALADCGVEDVAVCGLAKRLEEVWVPDD
DYPIILKRTSEGLYLLQRVRDESHRFAITYHRQARRKGALRSALDDIPGIGPAYQKRLLA
HFGSVRAMREASVDELEAVKGVGHAKAQRIHDALHGGTRNTGTTQREAAQSAAGAGDKVG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgttttcgaacgccatgcgccagactcctggcaagacatggcacacgacctaatc
gccagcatgcccgcacaggacacgagcggcggcaccaatgccaacggggcgccactgctc
ggcgacacacgcgacctgttccgcccgcgcaccggcgacattcccgcacagcccggcgtc
tacaagtggagggacggggagggccgcgtgatctacgtgggcaaggcgaagaacctgcgc
aaccgcctgacgaactacttccagccactgcaccaactgcacccgcgcacccagaccatg
gtgctcaccgcgcggtcgctcgaatggaccgtggtcggcaccgaactggaagcgctcacc
ttggaatacacatggatcaaggaattcgacccgcggttcaatgtggtgttccgtgacgac
aaaacctatccttaccttgccgtctccgtgggcgaggaatacccccgcgtatgggtcacc
cgcagccgcaaacgccgtgacacgaggtatttcggcccctacgccaaagtgtgggacctg
cgcaaaagcctggaccgcctgctgcgcaccttccccgtgcgcacttgcgcgcccgccgtg
ttccgcaaagcgcgcctcaccggacgaccatgcctgctcgcatcgatcggcaaatgctcc
gcgccatgcgtggggcgcatcgaagccagtgcgcaccggcgcatgtgcgagcaactcgtg
ggcgtactgactgggcgcgtgggcaaatcgtacatcgcccagctcaccgcgcagatgaag
gaggcgagcgccgacctcgacttcgagcgcgcggcgcggctgcgtgacgacatccagatg
ctcggcaccgtgatggagcagaacgcggtcgtgctcgaccaggatgtggacgccgacgtg
ttcggattcgccaccgacgagctcgaggcgtccgtgcatgcgttcttcgtgcgctcgggc
accattcggggtgaacgcaattggagtgtggagcgcgccgacgaagtggacgacggcgaa
ctgatggccgatctgattgtccaagtgtattccgagctgacgcatgaggcggccagcaca
ccgcgtgcggacgcaccggaagacggaggggcggcgcaaggcgcatcccagtcgctcatc
atcaacgagcaacgcaacgcgatcgccgattcgcagcagatcaccgcgacagacgccacc
gcgcgcgcccaggccacgcgcgcccgtacacgccgcatggagcagaccgggcgagccgac
ctgctcgagccggtggcgccggtgccccggcagatcctgctgccgttcgcaccggcgcgc
gccgacgagctggagcaatggctgtcggggctgcgcgggggagcggtctcaatcaccgtg
ccgatgcgcggcaacaaaaagcagctgctcgaccgcgccgaccagaacgcgcagcaggcg
ttgcaacgcagcaagatgagccgcatcagcgacatcggcacacgcaccgcggccatgaac
gatgtggcacaggcgcttggactggatcaggccccattgcgcatcgaatgctacgacatc
tcgaacaccgtgggaggcgcgtttcaggtggcgtcgatggtggtgttcgaagacggcatc
gccaagaaatccgaataccggcggttcgcgatccgcggcgacgacggcactggcgcactt
gatgacctttccgcgctgtacgagacgctgacgcgcaggttcaaacacggcaacatcgcc
ggcgacagcggcgaaagcctcgacaatgagcggcgagccggcggccagcccgccgatgag
gatgtggtgcggcagaacaccaaccgcaggcatttcgcctacaaacccaatcttgtggtg
gtcgatggcggcaagccgcaggtcatggcggcggcacaggccttggctgattgcggtgtg
gaagacgtggcggtgtgcggtttggccaagcggctcgaagaggtgtgggtgccggacgat
gactacccgatcatcctcaaacgcacctccgagggcctgtatctgctgcagcgggtgcgt
gacgaatcccaccggttcgccatcacctaccatcggcaggcacgccgcaaaggcgcgctc
cggtcggccctcgacgacattccgggcatcggccctgcctaccagaagcgtctgttggcg
catttcggttcggtgcgcgccatgcgtgaggccagcgtcgatgaactcgaagcggtcaaa
ggtgtcggccatgccaaggcgcaacgcatccacgacgcattgcacggagggacgcgaaac
accggcaccacgcagcgagaagccgcgcagagtgcggccggtgccggtgataaggtaggg
tag
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integrated database retrieval system