KEGG   Bifidobacterium pseudolongum: AH67_04650
Entry
AH67_04650        CDS       T03529                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bpsp  Bifidobacterium pseudolongum
Pathway
bpsp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AH67_04650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsp03400]
    AH67_04650
DNA repair and recombination proteins [BR:bpsp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AH67_04650
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 UVR HHH_2 GIY-YIG HHH UPF0758_N HHH_3 DUF4124 IMS_HHH
Other DBs
NCBI-ProteinID: AIZ16301
UniProt: A0A0A7I8A8
LinkDB
Position
complement(1035864..1038206)
AA seq 780 aa
MSVFERHAPDSWQDMAHDLIASMPAQDTSGGTNANGAPLLGDTRDLFRPRTGDIPAQPGV
YKWRDGEGRVIYVGKAKNLRNRLTNYFQPLHQLHPRTQTMVLTARSLEWTVVGTELEALT
LEYTWIKEFDPRFNVVFRDDKTYPYLAVSVGEEYPRVWVTRSRKRRDTRYFGPYAKVWDL
RKSLDRLLRTFPVRTCAPAVFRKARLTGRPCLLASIGKCSAPCVGRIEASAHRRMCEQLV
GVLTGRVGKSYIAQLTAQMKEASADLDFERAARLRDDIQMLGTVMEQNAVVLDQDVDADV
FGFATDELEASVHAFFVRSGTIRGERNWSVERADEVDDGELMADLIVQVYSELTHEAAST
PRADAPEDGGAAQGASQSLIINEQRNAIADSQQITATDATARAQATRARTRRMEQTGRAD
LLEPVAPVPRQILLPFAPARADELEQWLSGLRGGAVSITVPMRGNKKQLLDRADQNAQQA
LQRSKMSRISDIGTRTAAMNDVAQALGLDQAPLRIECYDISNTVGGAFQVASMVVFEDGI
AKKSEYRRFAIRGDDGTGALDDLSALYETLTRRFKHGNIAGDSGESLDNERRAGGQPADE
DVVRQNTNRRHFAYKPNLVVVDGGKPQVMAAAQALADCGVEDVAVCGLAKRLEEVWVPDD
DYPIILKRTSEGLYLLQRVRDESHRFAITYHRQARRKGALRSALDDIPGIGPAYQKRLLA
HFGSVRAMREASVDELEAVKGVGHAKAQRIHDALHGGTRNTGTTQREAAQSAAGAGDKVG
NT seq 2343 nt   +upstreamnt  +downstreamnt
gtgagcgttttcgaacgccatgcgccagactcctggcaagacatggcacacgacctaatc
gccagcatgcccgcacaggacacgagcggcggcaccaatgccaacggggcgccactgctc
ggcgacacacgcgacctgttccgcccgcgcaccggcgacattcccgcacagcccggcgtc
tacaagtggagggacggggagggccgcgtgatctacgtgggcaaggcgaagaacctgcgc
aaccgcctgacgaactacttccagccactgcaccaactgcacccgcgcacccagaccatg
gtgctcaccgcgcggtcgctcgaatggaccgtggtcggcaccgaactggaagcgctcacc
ttggaatacacatggatcaaggaattcgacccgcggttcaatgtggtgttccgtgacgac
aaaacctatccttaccttgccgtctccgtgggcgaggaatacccccgcgtatgggtcacc
cgcagccgcaaacgccgtgacacgaggtatttcggcccctacgccaaagtgtgggacctg
cgcaaaagcctggaccgcctgctgcgcaccttccccgtgcgcacttgcgcgcccgccgtg
ttccgcaaagcgcgcctcaccggacgaccatgcctgctcgcatcgatcggcaaatgctcc
gcgccatgcgtggggcgcatcgaagccagtgcgcaccggcgcatgtgcgagcaactcgtg
ggcgtactgactgggcgcgtgggcaaatcgtacatcgcccagctcaccgcgcagatgaag
gaggcgagcgccgacctcgacttcgagcgcgcggcgcggctgcgtgacgacatccagatg
ctcggcaccgtgatggagcagaacgcggtcgtgctcgaccaggatgtggacgccgacgtg
ttcggattcgccaccgacgagctcgaggcgtccgtgcatgcgttcttcgtgcgctcgggc
accattcggggtgaacgcaattggagtgtggagcgcgccgacgaagtggacgacggcgaa
ctgatggccgatctgattgtccaagtgtattccgagctgacgcatgaggcggccagcaca
ccgcgtgcggacgcaccggaagacggaggggcggcgcaaggcgcatcccagtcgctcatc
atcaacgagcaacgcaacgcgatcgccgattcgcagcagatcaccgcgacagacgccacc
gcgcgcgcccaggccacgcgcgcccgtacacgccgcatggagcagaccgggcgagccgac
ctgctcgagccggtggcgccggtgccccggcagatcctgctgccgttcgcaccggcgcgc
gccgacgagctggagcaatggctgtcggggctgcgcgggggagcggtctcaatcaccgtg
ccgatgcgcggcaacaaaaagcagctgctcgaccgcgccgaccagaacgcgcagcaggcg
ttgcaacgcagcaagatgagccgcatcagcgacatcggcacacgcaccgcggccatgaac
gatgtggcacaggcgcttggactggatcaggccccattgcgcatcgaatgctacgacatc
tcgaacaccgtgggaggcgcgtttcaggtggcgtcgatggtggtgttcgaagacggcatc
gccaagaaatccgaataccggcggttcgcgatccgcggcgacgacggcactggcgcactt
gatgacctttccgcgctgtacgagacgctgacgcgcaggttcaaacacggcaacatcgcc
ggcgacagcggcgaaagcctcgacaatgagcggcgagccggcggccagcccgccgatgag
gatgtggtgcggcagaacaccaaccgcaggcatttcgcctacaaacccaatcttgtggtg
gtcgatggcggcaagccgcaggtcatggcggcggcacaggccttggctgattgcggtgtg
gaagacgtggcggtgtgcggtttggccaagcggctcgaagaggtgtgggtgccggacgat
gactacccgatcatcctcaaacgcacctccgagggcctgtatctgctgcagcgggtgcgt
gacgaatcccaccggttcgccatcacctaccatcggcaggcacgccgcaaaggcgcgctc
cggtcggccctcgacgacattccgggcatcggccctgcctaccagaagcgtctgttggcg
catttcggttcggtgcgcgccatgcgtgaggccagcgtcgatgaactcgaagcggtcaaa
ggtgtcggccatgccaaggcgcaacgcatccacgacgcattgcacggagggacgcgaaac
accggcaccacgcagcgagaagccgcgcagagtgcggccggtgccggtgataaggtaggg
tag

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