Bacillus pumilus SAFR-032: BPUM_3588
Help
Entry
BPUM_3588 CDS
T00599
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K05346
deoxyribonucleoside regulator
Organism
bpu
Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpu03000
]
BPUM_3588
Transcription factors [BR:
bpu03000
]
Prokaryotic type
Other transcription factors
Others
BPUM_3588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
Sigma70_r4
MarR_2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
HTH_IclR
HTH_3
Terminase_5
Crp
HTH_36
HTH_38
HTH_28
UPF0122
Sigma70_ECF
DUF134
MarR
HTH_11
TrmB
Fe_dep_repress
HTH_40
HTH_37
HTH_10
GerE
HTH_29
HTH_5
HTH_54
Xre-like-HTH
GntR
DeoRC
HTH_7
HTH_Tnp_ISL3
DUF1643
Motif
Other DBs
NCBI-ProteinID:
ABV64232
UniProt:
A8FJ15
LinkDB
All DBs
Position
complement(3550490..3551434)
Genome browser
AA seq
314 aa
AA seq
DB search
MDREKQQLSIEAARLYYLSDYSQQEIAKQLDLSRPTVSRLLQYAKEKGYVQITVMDPFED
LNELSSLLKEKYDLLEAHVVFSPKDDYPTITEYLSQFGAEYLQNTVKDGDIVGVSWGTTM
YQIAQKMQPKQVKGVEVVQLKGGISHSHVNTYSAETIQLFAEAFQTAPRYLPLPVVFDSA
AVKEMVEQDRHIQRIIEMGKQANIAVFTVGTVRDEALLFRLGYFREEEKALLKASSVGDI
CSRFYDQEGRICSEAINNRTIGVELDDLRTKERSILVAGGHRKVASIHGALRGKYANVLI
IDQHTAKALLNVTK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatcgggagaaacaacaactgagtattgaagcggcaaggctatattatttatcggat
tacagccagcaggaaattgccaaacagctcgacctgtcgagaccaactgtatctcggctg
cttcaatatgcgaaggagaaggggtacgtccagataacggtaatggacccgtttgaagac
ttaaatgagctttcttcgttgctcaaggaaaaatatgacctgctcgaagctcatgtggtg
ttttcgcccaaagatgattatcctacgatcaccgaatacttgagccaatttggtgctgag
tacttgcaaaacacagtaaaagacggtgatatcgttggtgtgagctggggaaccactatg
tatcaaattgctcaaaagatgcaacctaaacaggtcaaaggtgtagaggttgtccagctg
aagggtgggattagccactcccatgtgaatacatattctgcggaaaccatccagctgttt
gccgaggcctttcaaacagcaccgcgctatttgccgcttcctgttgtatttgatagtgct
gccgtcaaagagatggttgaacaggacagacatattcagcgcatcattgaaatgggcaaa
caggcgaatattgctgtgttcactgttggaacggtaagagatgaagcccttttgtttaga
cttggttacttccgcgaagaagaaaaagcactgctcaaagcatccagcgtcggagacatc
tgctcgcgcttttatgatcaagaaggccgcatttgcagtgaagcgattaacaaccgtacg
attggcgtggagcttgatgatttaaggacaaaagaacgttctattcttgttgctggcgga
catcgcaaggtagcttctatccacggggcactaagaggaaaatatgcgaacgtcttgatt
attgatcagcatacagcaaaggctcttttaaatgtcacaaaatag
DBGET
integrated database retrieval system