Paraburkholderia phenoliruptrix: BUPH_08514
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Entry
BUPH_08514 CDS
T02300
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
bpx
Paraburkholderia phenoliruptrix
Pathway
bpx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BUPH_08514 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpx03000
]
BUPH_08514 (nifA)
Transcription factors [BR:
bpx03000
]
Prokaryotic type
Helix-turn-helix
Other families
BUPH_08514 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
GAF_2
AAA
Mg_chelatase
AAA_2
bpMoxR
AAA_16
Parvo_NS1
AAA_7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFT90567
UniProt:
K0E1A5
LinkDB
All DBs
Position
pSYMBR3459:694173..695816
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AA seq
547 aa
AA seq
DB search
MPHFHLNDSLPDFDVVYEVVKTLVSSRDAERTLDKSLRYLSYALGWRSAFIAVTEPDGHL
CSLCSTGLSEGWRDRARFLSGEGIVGRLHSSDAAVVVPELNEEPLFADDIGAVGGSEGEH
VALLGTPIRHEGRPLGVLVAFCENPDGKRTFGDDLQLMKIVAAPMAQALLLHRDEKAMHD
GAEPVRRPRKETIRAYQLDNTIGASAAMQQVFAQVHQVAPARTTVLLRGESGTGKELIAR
SICRLSPRKEQPFIAVNCAALTETLLESELFGHEKGAFTGAQSQRKGRFELAHGGTLFLD
EIGDISSSFQAKLLRVLQEREFERVGGATPVRVDVRLIVATNRNLERMVRDGEFRADLYY
RINVVSILLPPLRERREDIPAMAQYFLDRFNRDNGRLLRFSDEALRVLSNCYWPGNVREL
ENCVERTATMTHHDIIDRLSFLCEIDQCLTKVLHHIEREDAVRPGPSSNLVASEAPNALA
SGHAADLNGGRFDVPGGDGRPEGERERLVWAMERCGWVQAKAARLLGITPRQIGYALRKH
EIEVRRF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgccgcattttcatctcaacgatagtcttccagatttcgatgtggtctacgaagtagta
aagacgctagtctcgtcccgtgacgccgagcggacgttggacaagtcgctgcgttatctg
tcatatgcgctcggatggcgctcggcgttcatcgccgtcacggaaccggacggacatctg
tgcagtttgtgcagcactgggttgtcagagggctggcgcgaccgcgcgcgcttcctgtcc
ggagaggggatcgtaggacggttgcactcgagcgacgcggcagtggttgtgcctgagctg
aatgaagaaccgcttttcgcggacgacatcggagccgtcggtggatccgagggtgaacat
gtcgctctgctcgggactccgatccggcacgaagggcggccgctcggcgtgcttgtggct
ttttgcgagaatccggacggcaagcgtactttcggcgatgaccttcagcttatgaagatt
gtagcggcgccgatggcacaggcgctgctgcttcatcgggacgagaaggccatgcacgac
ggcgcagagccggtcaggcgcccgcgtaaggaaaccattcgtgcatatcagctcgataac
acgatcggtgcgtcggcggcgatgcagcaggtattcgcgcaggtccatcaagtggcgccg
gcgagaacgacggtgctgttgcggggcgagagcggtacgggcaaggaattgatcgcgcgt
tcaatctgtcgtctatccccgcgcaaggagcagccattcatcgcggtgaattgtgcggcg
ctcacggaaacgctgctcgaaagcgagttgttcggccacgagaagggcgcgttcactggg
gcgcaatctcaacgcaaggggcgtttcgagctagcgcacggcgggacacttttcctcgac
gaaatcggcgatatctcttcgtccttccaggcgaagctcttgcgcgttttgcaagagcgg
gagttcgaacgggtaggtggcgcgacgccggtaagagttgacgtaaggctgattgttgcg
acgaatcgcaatctggaacgaatggtgagggacggggagttccgcgcggatctgtattac
cgcatcaacgtggtaagtattcttttgccgccgctgcgcgagcgtcgcgaagacattccg
gcgatggcacagtatttcctcgatcgtttcaaccgcgacaacggtcgcttactgcgcttc
agcgacgaagcattgcgcgtgctgtcgaactgttactggcccggcaacgtgcgggaactc
gagaactgtgttgagcgcactgcgacgatgacacaccatgacatcatagatcgcctttcc
ttcctctgcgagatcgaccagtgcctgacgaaggtattgcatcacatcgagcgtgaagat
gctgtgcgtcccggtccctcgtcgaaccttgttgcgagcgaagcgccgaacgcgctggca
agtggccacgccgccgatcttaacggcggccggttcgatgtccctggcggcgacggcagg
ccggagggcgagcgtgagcggctcgtctgggcaatggagcgttgtggctgggtgcaggcg
aaagcagcacggctcctcggcatcacgccgcggcagattggctacgcgctacgcaagcac
gagatcgaggtacgtcgcttctga
DBGET
integrated database retrieval system
