Burkholderia pyrrocinia: ABD05_05930
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Entry
ABD05_05930 CDS
T03962
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bpyr
Burkholderia pyrrocinia
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpyr03032
]
ABD05_05930 (gyrB)
03400 DNA repair and recombination proteins [BR:
bpyr03400
]
ABD05_05930 (gyrB)
Enzymes [BR:
bpyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABD05_05930 (gyrB)
DNA replication proteins [BR:
bpyr03032
]
Prokaryotic type
DNA Topoisomerases
ABD05_05930 (gyrB)
DNA repair and recombination proteins [BR:
bpyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABD05_05930 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AKL99785
UniProt:
A0A0G3WPE9
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All DBs
Position
1:1276547..1279021
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AA seq
824 aa
AA seq
DB search
MSEQHNSQPDNSSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEA
LAGYCNDIHVTIHADNSISVTDNGRGIPTDVKMNDKHEPKRSAAEIVMTELHAGGKFDQN
SYKVSGGLHGVGVSCVNALSSWLRLTVRRGGKKRFMEFHRGIAQDRVLEMVDGVEVSPML
VTGDTENRGTEVHFMADPTIFGTVEYHYDILAKRMRELSFLNNGVRIRLTDLRSGKEDDF
AFAGGVKGFVEYINKTKTNLHPTIFHANGEKDGVGVEVAMQWNDSYNENVLCFTNNIPQR
DGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSCVLSVKVPEPKFSSQT
KDKLVSSEVRAPVEEVVAKALEEFLLETPLDAKIICGKIVEAARARDAARKAREMTRRKG
VLDGVGLPGKLADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKA
RYDKLLSSEQIVTLVTALGCGIGKDDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFLYR
QMPDMIERGYVYIAQPPLYKIKAGKDERYLKDDVELNAHMLRLALQGSELVPGENAAVIS
GDALGELARSYLLSRSVIDRLSRLYDPAALEAIMDGVAIDLSNEASTEASAKALHAALHD
EALKNEVRVVPSYDPVREQRSLHVERTHHGNVRVSVIDQEFQHTADYQQLVATANTFTGL
IGEGAVIKRGERSMAVTDFKSAMKWLLADAERNVSKQRYKGLGEMNPGQLWETTMDPTVR
RLLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacagcacaattcgcaacccgataacagcagctacggcgcctcgtcgatccag
atcctcgaaggtctggaagcggtgcgcaagcgccccgggatgtacatcggcgacacgtcg
gacggcaccggtctgcatcacctcgtgttcgaggtgctcgacaactcgatcgacgaagcg
ttggccggatactgcaacgacatccacgtcacgattcacgccgacaactcgatttccgtg
accgacaacggccgcggaattccgaccgacgtgaagatgaacgacaagcacgagccgaag
cgcagcgccgccgagatcgtgatgaccgagctgcacgccggcggcaagttcgaccagaac
agctacaaggtgtccggcggcctgcacggcgtgggcgtgtcgtgcgtgaacgcgctgtcg
agctggctgcgcctcaccgtgcgccgcggcggcaagaagcgtttcatggagttccatcgc
ggcatcgcgcaggatcgcgtgctcgagatggtggacggcgtggaagtgtcgccgatgctg
gtgaccggcgataccgagaaccgcggcaccgaagtgcacttcatggccgatccgaccatt
ttcggcacggtcgagtatcactacgacatcctcgcgaagcggatgcgcgagctttcgttc
ctgaacaacggcgtgcggattcgtttgaccgacctgcgttcgggcaaggaagacgatttc
gcgttcgccggcggtgtgaagggcttcgtcgagtacatcaacaagacgaagaccaacctg
cacccgacgattttccacgccaacggcgagaaggatggcgtgggcgtcgaagtcgcgatg
cagtggaacgacagctacaacgagaacgtgctgtgcttcacgaacaacattccgcagcgc
gacggcggcacgcacctgaccggcctgcgggccgcgatgacgcgcgtcatcaacaagtac
atcaccgacaacgaaatcgcgaagaaggccaaggtcgaaacgaccggcgacgacatgcgc
gaagggttgtcgtgcgtgctgtcggtgaaggtgccggagccgaagttcagctcgcagacg
aaggacaagctggtttcgtccgaagtgcgcgcgccggttgaagaagtcgtggcgaaggcg
ctggaagagttcctgctcgaaacgccgctcgacgcgaagatcatttgcgggaagatcgtc
gaagccgcgcgtgcgcgcgatgctgcgcgcaaggcgcgcgagatgacgcgccgcaagggc
gtgctcgacggcgtcggcctgccggggaagctcgcggactgccaggagaaagacccggcg
aagtgcgaaatctacatcgtcgagggcgactcggcaggcggctcggccaagcaagggcgt
gaccgcaagttccaggcaatcctgccgctgcgcggcaaggtgctgaacgtcgagaaggcg
cgttacgacaagctgctgtcgtcggagcagatcgtcacgctcgtgaccgcgcttgggtgc
ggcatcggcaaggacgattacaacctcgacaagctgcgctatcaccgcatcatcatcatg
accgacgcggacgtcgacggtgcgcacatccggacgctgctgctcacgttcctctatcgg
caaatgccggacatgatcgagcgcgggtatgtgtatatcgcgcagccgccgctttacaag
atcaaggcaggcaaggacgagcggtatctgaaggacgatgtggagctcaacgcgcacatg
ctgcggttggcgctgcaagggtcggagctggtgcctggcgagaatgcggccgtgatttcc
ggcgatgcgcttggggagttggcgcggtcgtatctgctgtcgaggagcgtaatcgatcgg
ttgagccggttgtatgacccggcggcgctggaagcgatcatggacggggttgcgatcgat
ctctccaacgaggcttctacggaggcttcggcgaaggcgctgcacgctgcgttgcatgac
gaggctttgaagaacgaagtgcgcgtggtgccttcgtatgatccggtgcgcgagcagcgg
tcgctgcatgtcgaacgtacccatcacgggaatgtgcgggtttcggtcatcgatcaggaa
ttccagcacacagcggattatcagcagctcgtggccaccgcgaatacgttcacggggctg
attggggaaggtgctgttatcaagcgtggtgagcgcagcatggccgtgacagacttcaag
agcgcgatgaagtggctgcttgcggatgccgagcggaacgtgtcgaagcagcggtataag
gggctgggggagatgaaccccgggcagctgtgggaaacgacgatggatccgacggtgcgg
cggttgttgcgtgtgcagatcgaagacgcgattgccgcggatgggatctttactacgctg
atgggggatgatgtggagccgaggcgggcgtttattgagtcgaatgcgttgagggcgggg
aatattgacgtttaa
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