KEGG   Burkholderia pseudomallei 1026b: BP1026B_II2379Help
Entry
BP1026B_II2379    CDS       T02049                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bpz  Burkholderia pseudomallei 1026b
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bpz00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BP1026B_II2379
Enzymes [BR:bpz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BP1026B_II2379
DNA repair and recombination proteins [BR:bpz03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BP1026B_II2379
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2:complement(2946898..2950362)
Genome map
AA seq 1154 aa AA seqDB search
MAGKLSVYRSRRRFGETPEPEGARRSPRRTKGAGRAGDESKRRARGDAAASSRGERAARR
GRAQQPAPARGRSALHYVIQEHHARRLHYDFRLELDGTLKSWAIPKGPSLDPSVKRLAVH
VEDHPLEYAAFEGEIPEGHYGAGSVIVWDRGAWTPAGGVAAARAGYRAGKLSFTLDGDKL
HGGWALVRGRGLRDSGGKHEQWLLIKERDGDARDQADYDVLRARPGSVLGGARSARARRG
RAAEPTERDAAAPKRARASVPKGRAEAKTSGRAPRTVSNGTAGAGKGASKRASKREGTNT
GNGARSGKGSGKGAGEGVATSRRKRAAAPQSSDVDSADTDSPAARGLALPAGLAARFGLS
GAKRAALPRTLRPQLATLVDTPPPGKDWLYEAKFDGYRVLIRIDRGAASRPIAVYTREGL
DWSAKFAAQLDALARLPVDRGWLDGEAVVLDRAGVPDFQALQNALGAGRSNDVTLFLFDV
PFLNGFDLRGVPLERRRALLAALVAAHASDVLRYSESLAFEAADLLTGACDAGLEGLIGK
RRDGRYVEGRSRSWIKLKCRRRQEFVIGGYTEPAGRRSGFGALLLGVYARAPGDEGERRT
RGAAETRDERRRASRTSRTSRAPDAGAARAPQARPLALRYVGRVGTGFGERTLRALARTL
REHETGRMPFADVPRERSGTPVHWVKPVLVAECEFAEWTGDGIVRQASFVGLREDKPART
IVREQPQSMETEAMNEHADEHTDEHTDARAERRTGGRTRRKARDGGARDAPPLARHPKRG
DAGSSARKGARDGEAGKRAAAGSSPSSSPSSSTSTSPSISASGRTRGGGRSASRDRAGDA
DEGANEGVNDHAPRERAGAPKVAGVRVSHPGRVIDPHTGTRKLDLVEYWEWIAPWLLPHL
KGRPVSLVRAPADIGGELFFQKHADKLEIPNVALHAGLDPGHEALITIDDVKGLVGAAQM
GTIELHTWNAHVSNIEKPDRAVFDLDPDPSLDWRAVIEAAQLTRALLDELGLVSFCKTSG
GKGLHVVVPLARHAGWDDVKAFAHAVARHMAATLPERFTATMGPRNRKGKIFVDYLRNNR
GASTIAAYSVRARPGLGVSVPIAWDELPDTTGAAQWTLANLHERLDALKHDPWRAYAHVR
QRVTAALRKRLSDG
NT seq 3465 nt NT seq  +upstreamnt  +downstreamnt
atggcgggaaaactcagcgtgtaccgcagcaggcggcgcttcggcgaaacgccggagccc
gagggcgcgcggcggtcgccgcgccgcacgaaaggcgcgggccgcgcgggcgacgaatcg
aagcggcgcgcgcgcggcgatgcggcggcgtcgagccgcggcgagcgcgccgctcgccgt
ggccgcgcgcagcagccggcgccggcgcgcggcaggtccgcgcttcattacgtgatccag
gagcatcacgcgcgccgcttgcattacgactttcgtctcgaactcgatggcacgctcaaa
tcgtgggcgatcccgaaagggccgagcctcgatccttcggtcaagcggctcgcggtgcac
gtcgaggatcatccgctcgaatacgcggcgttcgagggcgagattccggaaggccattac
ggcgcgggctcggtgattgtctgggatcgcggcgcatggacgcccgccggtggcgtcgcc
gccgcgcgcgccggctatcgcgcgggcaagctgagcttcacgctcgacggggacaagctg
cacggcggctgggcgctcgtgcgcggccgcgggctgcgtgacagcggcggcaagcacgag
caatggctgctgatcaaggaacgcgacggcgacgcgcgcgaccaagcggactacgacgtg
ctgcgcgcacggccgggcagcgtgctcggcggcgcgcggtccgcgcgggcgaggcgcggg
cgcgcggccgagccgacggagcgcgacgccgccgcgccgaagcgggcgcgcgcttcagtg
ccgaaagggcgcgccgaagcgaagacgagcgggcgtgcgccgcgcaccgtgtcgaacggg
actgcgggcgcgggtaagggcgcaagcaagcgtgcaagcaagcgcgagggcacgaatacc
ggaaacggcgcgagaagcggcaagggcagcggcaagggcgcgggcgagggcgtggccaca
tcgcgccgcaaacgcgccgccgcgccgcagtcgtccgacgtcgattcggccgataccgat
tcacccgcggcgcgcggcctcgcgttgcccgccgggcttgccgcgcgcttcggcctgagc
ggcgcgaagcgcgcggcgctgccgcgcacgttgcggccgcaactggcgacgctcgtcgac
acgccgccgcccggcaaagactggctatacgaagcgaagttcgatggctaccgcgtgctg
atccggatcgatcgcggcgcggcgtcccgcccgattgccgtctacacgcgcgaggggctc
gactggagcgcgaaattcgccgcgcagctcgacgcgctcgcgcgcctgccggtcgaccgg
ggctggctcgacggcgaggcggtcgtgctcgatcgcgcgggcgtgccggatttccaggcg
ctgcagaacgcgctcggcgccggacgctcgaacgatgtcacgctgttcctgttcgacgtg
ccgttcctgaacggcttcgacctgcgcggcgtgccgctcgaacggcggcgcgcgctgctc
gccgcgctcgtcgccgcgcatgcgagcgacgtgctgcgctactcggagagcctcgcgttc
gaggccgccgatctgctgacgggcgcgtgcgacgcggggctcgaagggctgatcggcaag
cggcgcgatggccggtacgtcgaggggcgctcgagatcgtggatcaagctgaagtgccgg
cgcaggcaggagttcgtgattggcggctacacggagccggccggacggcgcagcggattc
ggcgcgttgctgctcggcgtgtacgcccgggcgccgggcgacgagggcgaacgaaggacg
cgcggcgcggccgaaacgcgcgacgagcggcgtcgtgcatcccgcacatcccgcacatcc
cgcgcgcccgatgccggcgcggcgcgcgcaccgcaggcgcggccgctcgcgttgcgctac
gtcggccgcgtcggcaccggcttcggcgagcgcacgcttcgcgcgctcgcgcggacgctg
cgcgagcacgagaccgggcggatgccgttcgcggacgtgccgcgcgagcgcagcggcacg
ccggttcactgggtgaagcccgtgctcgtcgccgaatgcgaattcgcggaatggacgggc
gacggcatcgtccggcaggcgtcgttcgtcgggctgcgcgaagacaagccggcgcgcacg
atcgttcgcgagcaaccgcaatccatggagacggaagccatgaatgaacacgctgacgaa
catacggatgaacataccgatgcacgcgccgaacgtcgcaccggcggacgcacgcggcgc
aaagcacgtgacggcggcgcgcgcgacgcgccgccgcttgcccgtcatccgaagcgcggc
gatgcgggatcgtccgcgcgcaagggcgcgcgggacggggaggcgggcaagcgcgccgcc
gcgggatcgtcgccttcgtcttcaccgtcgagttcgacttcgacttcgccttcgatttcg
gcgtcagggcgcacgcgcgggggcggtcgttccgcctcgcgcgatcgagccggcgatgcg
gacgaaggtgcgaacgaaggcgtgaacgatcacgcgccgcgcgagcgcgccggcgcgccg
aaggtggcgggcgtgcgcgtctcgcatcccggccgcgtgatcgatccgcacacgggcacg
cgcaagctcgacctcgtcgaatactgggaatggatcgcgccgtggctgctgccgcatctg
aagggccggccggtgtcgctcgtgcgcgcgcccgccgacatcggcggcgagctgttcttc
cagaagcacgcggacaagctggagattccgaacgtcgcgctgcacgcggggctcgacccg
ggccatgaggcgctcatcacgatcgacgatgtgaaggggctcgtcggcgccgcgcaaatg
ggcacgatcgagctgcacacgtggaacgcgcacgtgtcgaacatcgagaagccggaccgc
gcggtgttcgacctcgacccggacccgtcgctcgactggcgcgcggtgatcgaggccgcg
cagctcacgcgcgcgctgctggacgagctcggcctcgtgtcgttctgcaagacgagcggc
ggcaaggggctgcacgtcgtcgtgccgctcgcgcgccatgcgggctgggacgacgtgaag
gcgttcgcgcacgcggtggcgcggcacatggcggcgaccctgcccgagcgcttcaccgcg
acgatggggccgcgcaaccggaagggcaagatcttcgtcgactatctgcgcaacaaccgc
ggcgcgagcacgatcgccgcgtactcggtgcgcgcgaggccggggcttggcgtatcggtg
ccgatcgcatgggacgaactgccggatacgacgggcgccgcgcaatggacgctcgcgaac
ctgcacgagcgtctcgacgcgctgaagcacgacccgtggcgcgcctatgcgcatgtgcgg
caacgcgtgacggcggcgttgcggaagcggctgagcgatgggtag

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