Bartonella quintana RM-11: RM11_0717
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Entry
RM11_0717 CDS
T02294
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bqr
Bartonella quintana RM-11
Brite
KEGG Orthology (KO) [BR:
bqr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bqr03016
]
RM11_0717
Enzymes [BR:
bqr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RM11_0717
Transfer RNA biogenesis [BR:
bqr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RM11_0717
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-GeneID:
13563590
NCBI-ProteinID:
AFR26439
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Position
893710..894969
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AA seq
419 aa
AA seq
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MRYKRFLTTICQDMTMKTQKKNQYKDKLNLSGYNRMMRLITQTTDLEIALAALRPSDFVT
VDTEFIRETTFWPQLCLIQLASPDVTMLIDPMAQDMDLKPFFDLMVDEKIVKVFHAARQD
IEIIYHLGGVIPYPLFDTQIAGSICGFGDSISYDQIVQRCTGHQLDKSSRFTDWSCRPLS
EKQLLYALADVTYLRDVYLLLKKQLEKNKRMHWMDDEITTLSTPKTYDIPENEAWKKVKG
KIKKPRELAVLQKIAAWREREARRYNVPRRHIMKDECLIEIAIQQPKDESALNRLRSLNK
NWDKLSIAQTLIKTIHEGLEVDTATLPAVPKHNLLNDTKTAAIDLLKVLLKLVANENGIA
PKIIATSHDLEKIANGCIKQDIPAMNGWRYEIFGQKAEQMLKGKIGFYFRNGKIITKQL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgctacaaacgctttttaacaaccatttgtcaagatatgacgatgaagactcaaaaa
aaaaatcaatacaaagacaaattaaatttatctggttataatagaatgatgagacttatt
acacaaacaacagatcttgaaattgcacttgccgctttacgtccctctgattttgtcaca
gtagacacagaatttatccgcgaaacaactttttggcctcaactgtgtttaatccagctc
gcatcaccagatgttacaatgttgattgatccaatggcacaagatatggatctaaaacct
ttttttgacctaatggtagatgaaaaaattgttaaagtttttcacgctgcccgccaagac
attgaaattatttatcatctcggaggtgtcattccttatcctcttttcgacacccaaata
gcaggatcaatctgcggatttggtgattctatctcctatgatcaaattgtacaacgctgc
acggggcatcaacttgataaatcatcccgatttacagactggagctgccgccctctgtct
gaaaaacaattgctctatgcccttgccgatgtaacctatctaagagacgtttacctctta
ttgaaaaaacagctagaaaaaaacaagcgcatgcactggatggatgacgaaataaccact
ctatcaacaccgaaaacttacgatataccagaaaatgaagcatggaaaaaagtaaaagga
aaaataaaaaaaccccgtgaacttgctgtattacaaaaaatagcagcttggcgtgaacgc
gaagcacggagatataatgttccacgtcgccatatcatgaaagatgaatgccttatcgaa
attgcaattcaacaaccaaaagatgaatctgcattaaaccgtttgcgcagtcttaataaa
aattgggataaattatcaattgcgcaaacattaatcaaaactatccatgaaggcttagaa
gttgatactgctactttaccagccgttcctaaacataatctacttaacgatacaaaaact
gctgccattgatcttctcaaagtgttgttaaaactggtagcaaatgaaaatggcattgca
cccaaaatcattgcaacttctcatgatttagaaaaaatcgcgaatgggtgtataaagcaa
gatatccccgcgatgaatggttggcgctatgaaatatttggtcaaaaagctgaacaaatg
ttaaagggtaagataggattttattttagaaatggaaaaataatcaccaaacagctttaa
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