Bradyrhizobium sp. CCGE-LA001: BCCGELA001_21685
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Entry
BCCGELA001_21685 CDS
T04273
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brc
Bradyrhizobium sp. CCGE-LA001
Brite
KEGG Orthology (KO) [BR:
brc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brc03032
]
BCCGELA001_21685
03400 DNA repair and recombination proteins [BR:
brc03400
]
BCCGELA001_21685
Enzymes [BR:
brc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BCCGELA001_21685
DNA replication proteins [BR:
brc03032
]
Prokaryotic type
DNA Topoisomerases
BCCGELA001_21685
DNA repair and recombination proteins [BR:
brc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BCCGELA001_21685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AMA58620
UniProt:
A0A0X8CJF4
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All DBs
Position
4686013..4688751
Genome browser
AA seq
912 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLVATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALEAA
AYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIAPEAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDMSR
RPDSISRKLDADQAKLYELIWKRTIASQMEAAELERTTVDITAKAGGRTLELRATGQVIK
FDGFLALYQEGRDDEEDEDSRRLPGMSAGEALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFSRYVEYDFTAGLE
EQLDRISNNEISWQQVLKDFWRDFIGAVDDIKDLRVAQVLDVLDEMLGPHIYPPRADGGD
VRQCPNCGTGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGETTADRSLGQDPETGRDVW
VKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPSDVDLELALKLLSLPREIGKHPETG
QPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSRRFGADPGKA
IGDHPSLGTVTVKSGRYGAYVTAGGVNATIPAEFEKDAITLPQAIALIDERAAKGGGKTK
AKKAAKPAKAKKAADGEDAAPKAKKPAAKKAAAKSKTESTSKARAAVPSTAKTSPTKSAA
TKAPAKKSAGKT
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaaatatctgggc
tcgtcctacgaggtcctggcgtcgttcggccatgtccgcgacctccccgccaagaacggc
tccgtcgatcccgacgccaatttcaagatgatctgggaggtcgatcccaaagccgccggc
cggctgaacgatatcgcgaagtcgctgaaaggtgccgaccgcctgattctcgccaccgac
cccgatcgcgagggcgaggcgatctcctggcacgtgctggaggtgatgaaggagaagcgc
gcgctcaaggatcagaagatcgagcgcgtggtgtttaacgccatcaccaagcaagcggtc
acggacgcgatgaagcatccgcgccagatcgacggcgcgctggtcgacgcctacatggcg
cgacgggcgctggactatctggtcggcttcaccctctctcccgtgctgtggcgcaagctg
cccggcgcccgttcggccggccgcgtgcagtcggtcgcgctgcgcctcgtctgcgaccgc
gagctggagatcgagaagttcgtgccgcgcgaatattggtcgctggtcgcgacgctgctg
acgccgcgaggcgatgccttcgaggcccgcctcgtcggcgccgacggcaagaagatccag
cgcctcgacatcggcaccggcgcggaagccgaggacttcaagaaggcgctggaagccgcc
gcctatgccgtgaccgcggtcgatgccaagccggcgcggcgcaatccgcaggcgccgttc
accacctcgaccctccagcaggaggccagccgcaaatacggctttgcgcccgcgcacacg
atgcgcatcgcccagcgcctctatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgcccctgaggccatcacccaggcgcgc
aaggtgatcggcgaggactacggcaacgcctatgtgccggatgcgccgcgccagtaccag
gccaaggccaagaacgcccaggaagcgcacgaagcgatccgaccgaccgacatgtcgcgc
cgtcccgacagcataagccgcaagctcgatgccgatcaggcgaaactgtacgagctgatc
tggaagcgcaccatcgcgagccagatggaagcggccgagctcgagcgcaccacggtcgac
atcaccgccaaagccggcggccgtacgctggagctgcgcgccaccggccaggtcatcaag
ttcgacggcttcctcgcgctgtatcaggaaggccgcgacgacgaggaggacgaggattcc
cgccgcctgcccggcatgagcgccggcgaagccttgaagcggcagtcgctcgccgtcacc
cagcatttcaccgagccgccgccgcgcttctccgaggcttccctcgtcaagcggatggaa
gagctcggcatcggccggccctcgacctatgcctcgatcctgcaggtgctgaaggaccgc
ggctacgtcaagctggagaagaagcgcctgcatggcgaggacaagggccgcgtcgtggtc
gctttcctcgaaagcttcttcagccgctacgtcgaatacgacttcaccgcgggcctggag
gagcagctcgaccgcatctccaacaacgagatttcctggcagcaggtgctgaaggatttc
tggcgcgacttcatcggcgccgtcgacgacatcaaggatctgcgcgtcgcgcaggtgctg
gacgtgctcgatgagatgctggggccgcacatctatccgccccgcgccgatggcggcgac
gtcaggcaatgcccgaactgcggcactggtcggctgaacctgaaggccggcaagttcggc
gccttcgtcggctgctcgaactacccggagtgccgctacacccgccagctcgcggccgac
ggcgagacgaccgcggaccgttcgctcggccaggaccctgagacgggtcgcgatgtctgg
gtcaaggccggccgcttcggtccctatatccagctcggcgagcagaaggattacgaggaa
ggcgagaagcccaagcgcgccggcattccgaagggcacctcgcccagcgatgtcgatctc
gaactcgcgctgaagctcttgtcgctgccgcgtgagatcggcaagcatccggaaaccggt
cagccgatcaccgcaggtctcggccgcttcggaccgttcgtgaagcacgagaagacctat
gccagcctggaggctggcgacgaagtcttcgacatcggcctcaaccgtgccgtgacgctg
atcgcagagaaggttgcgaagggcccgagccgccgcttcggcgccgatcccggcaaggcg
atcggcgatcacccgagcctcggcacggtcaccgtgaagagcggtcgttatggcgcctat
gtcacggcgggcggcgtcaatgcgacgatcccggccgagttcgagaaggacgccatcacg
ctgccgcaggcgattgcgctgatcgacgagcgcgcggcgaaaggcggcggcaagaccaag
gcgaagaaggcggccaagcccgccaaggccaagaaggctgcggacggcgaggacgccgct
ccgaaggcgaagaagccggccgcgaagaaagccgcggccaaatccaaaaccgaatccacc
agtaaggcgcgcgccgccgtgccgtcgactgcaaagacgtcgccgaccaagagcgccgcc
accaaggctccggccaagaagagtgccggcaagacttga
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