Brassica rapa (field mustard): 103830770
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Entry
103830770 CDS
T03449
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00052
Galactose metabolism
brp00511
Other glycan degradation
brp00531
Glycosaminoglycan degradation
brp00600
Sphingolipid metabolism
brp00604
Glycosphingolipid biosynthesis - ganglio series
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
103830770
09103 Lipid metabolism
00600 Sphingolipid metabolism
103830770
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
103830770
00604 Glycosphingolipid biosynthesis - ganglio series
103830770
00511 Other glycan degradation
103830770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103830770
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
103830770
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103830770
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
TgpA_N
Motif
Other DBs
NCBI-GeneID:
103830770
NCBI-ProteinID:
XP_009104834
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All DBs
Position
A07:21425851..21430220
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AA seq
705 aa
AA seq
DB search
MLDQAYFCRRGTMAKISRPSTGRHRLAFVLLLFLVAVGICVPVFALLPSLSSHQYLPPAL
SRDEKMMSRRFYIKDDKFWKDENTFQIIGGDLHYFRVLPEYWEDRLMRAKALGLNTIQTY
VPWNLHEPKPGKFVFEGIADLVSFIKLCQKLDLLVMLRAGPYICGEWDLGGFPAWLLAVK
PPLRLRTADPAYLKLVERWWNILLRKVFPLLYSNGGPVIMVQIENEYGSYGNDKAYLRNL
VTMARGHLGNDIILYTTDGGTRETLEKGNVPLYNVYSAVDFSTGDDPWPIFELQKKFNAP
GRSPPLSSEFYTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNG
ANTGSDQFDYKPDLTSYDYDAPIKESGDIDNPKFKALQRVIKKYSAPPHSNVPSSNKRKA
YGSIKMQRTISLFDLMSMTDPVDVITSTNPISMESAGQMFGFLVYESSYISKKSGNILRI
PKVHDRGQVFVSCLSQDVDGGVLRYIGTTERWNNQPVSIPTTECASNTSLFILVENMGRV
NYGPYIFDEKGILSTVYLDGQILHGWKMIPIPFHNLNQMPNFSFEIQRTKKRSKKFELIK
DVGQKEPALFAGEFSISSVKESKDTYLSFNGWGKGVAFINKFNIGRYWPSVGPQCNLYVP
APLLKPGRNSVVIFELESPHVDLLLRSVDQEDFTCGSNDSKVNQL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcaagcttacttttgtagaagagggacgatggcgaagataagcaggccatca
acaggaagacatcgtttggctttcgtgttgcttctgtttcttgtggctgtcggaatctgt
gttcctgtctttgctctccttccgtcactgtcctctcatcagtatctgcctcctgcgcta
agtcgagacgagaagatgatgtctcggagattttatataaaagacgacaagttctggaaa
gatgagaatactttccagatcattggtggtgatttgcactacttccgagttcttcctgag
tactgggaagataggcttatgagagccaaggctttaggtctgaatactatacaaacgtat
gttccttggaatctgcacgaaccaaagcctgggaagtttgtctttgagggcattgctgat
cttgtgtcttttatcaagctttgtcagaaactagatttactggttatgctgcgtgctgga
ccttatatctgtggagaatgggatttgggcggttttcctgcttggttacttgctgtgaaa
ccacctctgagactaaggacagcagatcctgcataccttaagttggtggaaagatggtgg
aatattttattgcggaaggtatttcctctgctttacagcaacggtggtcctgttataatg
gtccagattgaaaatgaatatgggtcatatggaaatgacaaagcttatcttcgtaatcta
gttactatggctaggggacacctggggaatgacattattctgtatacaaccgatggaggt
acaagagaaacacttgagaaaggaaatgtccccttatataatgtctactcagctgttgac
ttcagtacgggtgatgacccttggcctatatttgaattgcaaaaaaagtttaatgctcca
ggaagatcacctccactttcttcggagttctacactggttggcttacgcattggggtgag
aagattgcgaaaacagatgctgaatttacggcagcttcccttgaaaagatattgtcccga
aatggttctgctgtgctatatatggtgcatggaggaacaaactttggtttctacaatgga
gcaaatactggctctgatcaattcgactacaaaccagatctgacttcctatgattatgat
gctccaattaaggaatctggtgacatagataatccaaaattcaaagctctccagagagtg
attaagaagtacagtgctccacctcactccaatgtcccctccagtaacaaacggaaagcg
tacggctcaatcaagatgcagaggacaatatctctgtttgatttgatgagtatgacagat
cctgtagatgtgatcacttccaccaacccaatttcaatggaatctgctggacagatgttt
ggatttcttgtatatgaatcttcatacatttccaaaaagagtgggaatatactaagaata
cccaaggttcatgacagaggtcaagtgtttgtgtcctgcctttcccaagatgttgatggg
ggagtactgcgatacattggtacaactgagagatggaacaaccaacctgtttctattcca
actactgagtgtgcctctaacactagcttatttattctggttgaaaacatgggacgtgta
aattacgggccatatatctttgatgagaagggtattctgtcaacggtttatttagatggt
cagattctccacggatggaagatgataccaattccttttcacaacttaaaccaaatgccg
aatttcagtttcgagatacaacgtaccaaaaagagaagtaagaagtttgagcttattaaa
gatgtgggtcaaaaggaaccagctctgttcgctggtgagttctctatcagcagtgttaaa
gaaagcaaagacacttatctatcattcaacggttggggtaaaggagttgcttttatcaat
aaattcaacataggaagatattggccgtctgttggaccacaatgcaacctctacgttcct
gcgccactccttaagcctggcagaaattctgtggtgatctttgagttggaatctccacat
gtcgaccttttgcttcggtcagtggatcaggaagacttcacatgcggttcaaatgattcc
aaagtcaatcagttgtag
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