KEGG   Brassica rapa (field mustard): 103830770
Entry
103830770         CDS       T03449                                 
Name
(RefSeq) beta-galactosidase 17
  KO
K12309  beta-galactosidase [EC:3.2.1.23]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00052  Galactose metabolism
brp00511  Other glycan degradation
brp00531  Glycosaminoglycan degradation
brp00600  Sphingolipid metabolism
brp00604  Glycosphingolipid biosynthesis - ganglio series
brp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    103830770
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    103830770
  09107 Glycan biosynthesis and metabolism
   00531 Glycosaminoglycan degradation
    103830770
   00604 Glycosphingolipid biosynthesis - ganglio series
    103830770
   00511 Other glycan degradation
    103830770
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103830770
Enzymes [BR:brp01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.23  beta-galactosidase
     103830770
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103830770
SSDB
Motif
Pfam: Glyco_hydro_35 BetaGal_ABD_1 BetaGal_gal-bd Glyco_hydro_42 BetaGal_ABD2 TgpA_N
Other DBs
NCBI-GeneID: 103830770
NCBI-ProteinID: XP_009104834
LinkDB
Position
A07:21425851..21430220
AA seq 705 aa
MLDQAYFCRRGTMAKISRPSTGRHRLAFVLLLFLVAVGICVPVFALLPSLSSHQYLPPAL
SRDEKMMSRRFYIKDDKFWKDENTFQIIGGDLHYFRVLPEYWEDRLMRAKALGLNTIQTY
VPWNLHEPKPGKFVFEGIADLVSFIKLCQKLDLLVMLRAGPYICGEWDLGGFPAWLLAVK
PPLRLRTADPAYLKLVERWWNILLRKVFPLLYSNGGPVIMVQIENEYGSYGNDKAYLRNL
VTMARGHLGNDIILYTTDGGTRETLEKGNVPLYNVYSAVDFSTGDDPWPIFELQKKFNAP
GRSPPLSSEFYTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNFGFYNG
ANTGSDQFDYKPDLTSYDYDAPIKESGDIDNPKFKALQRVIKKYSAPPHSNVPSSNKRKA
YGSIKMQRTISLFDLMSMTDPVDVITSTNPISMESAGQMFGFLVYESSYISKKSGNILRI
PKVHDRGQVFVSCLSQDVDGGVLRYIGTTERWNNQPVSIPTTECASNTSLFILVENMGRV
NYGPYIFDEKGILSTVYLDGQILHGWKMIPIPFHNLNQMPNFSFEIQRTKKRSKKFELIK
DVGQKEPALFAGEFSISSVKESKDTYLSFNGWGKGVAFINKFNIGRYWPSVGPQCNLYVP
APLLKPGRNSVVIFELESPHVDLLLRSVDQEDFTCGSNDSKVNQL
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgttagatcaagcttacttttgtagaagagggacgatggcgaagataagcaggccatca
acaggaagacatcgtttggctttcgtgttgcttctgtttcttgtggctgtcggaatctgt
gttcctgtctttgctctccttccgtcactgtcctctcatcagtatctgcctcctgcgcta
agtcgagacgagaagatgatgtctcggagattttatataaaagacgacaagttctggaaa
gatgagaatactttccagatcattggtggtgatttgcactacttccgagttcttcctgag
tactgggaagataggcttatgagagccaaggctttaggtctgaatactatacaaacgtat
gttccttggaatctgcacgaaccaaagcctgggaagtttgtctttgagggcattgctgat
cttgtgtcttttatcaagctttgtcagaaactagatttactggttatgctgcgtgctgga
ccttatatctgtggagaatgggatttgggcggttttcctgcttggttacttgctgtgaaa
ccacctctgagactaaggacagcagatcctgcataccttaagttggtggaaagatggtgg
aatattttattgcggaaggtatttcctctgctttacagcaacggtggtcctgttataatg
gtccagattgaaaatgaatatgggtcatatggaaatgacaaagcttatcttcgtaatcta
gttactatggctaggggacacctggggaatgacattattctgtatacaaccgatggaggt
acaagagaaacacttgagaaaggaaatgtccccttatataatgtctactcagctgttgac
ttcagtacgggtgatgacccttggcctatatttgaattgcaaaaaaagtttaatgctcca
ggaagatcacctccactttcttcggagttctacactggttggcttacgcattggggtgag
aagattgcgaaaacagatgctgaatttacggcagcttcccttgaaaagatattgtcccga
aatggttctgctgtgctatatatggtgcatggaggaacaaactttggtttctacaatgga
gcaaatactggctctgatcaattcgactacaaaccagatctgacttcctatgattatgat
gctccaattaaggaatctggtgacatagataatccaaaattcaaagctctccagagagtg
attaagaagtacagtgctccacctcactccaatgtcccctccagtaacaaacggaaagcg
tacggctcaatcaagatgcagaggacaatatctctgtttgatttgatgagtatgacagat
cctgtagatgtgatcacttccaccaacccaatttcaatggaatctgctggacagatgttt
ggatttcttgtatatgaatcttcatacatttccaaaaagagtgggaatatactaagaata
cccaaggttcatgacagaggtcaagtgtttgtgtcctgcctttcccaagatgttgatggg
ggagtactgcgatacattggtacaactgagagatggaacaaccaacctgtttctattcca
actactgagtgtgcctctaacactagcttatttattctggttgaaaacatgggacgtgta
aattacgggccatatatctttgatgagaagggtattctgtcaacggtttatttagatggt
cagattctccacggatggaagatgataccaattccttttcacaacttaaaccaaatgccg
aatttcagtttcgagatacaacgtaccaaaaagagaagtaagaagtttgagcttattaaa
gatgtgggtcaaaaggaaccagctctgttcgctggtgagttctctatcagcagtgttaaa
gaaagcaaagacacttatctatcattcaacggttggggtaaaggagttgcttttatcaat
aaattcaacataggaagatattggccgtctgttggaccacaatgcaacctctacgttcct
gcgccactccttaagcctggcagaaattctgtggtgatctttgagttggaatctccacat
gtcgaccttttgcttcggtcagtggatcaggaagacttcacatgcggttcaaatgattcc
aaagtcaatcagttgtag

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