KEGG   Brassica rapa (field mustard): 103845154Help
Entry
103845154         CDS       T03449                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
brp  Brassica rapa (field mustard)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:brp00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    103845154
Enzymes [BR:brp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103845154
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     103845154
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
A10
AA seq 1195 aa AA seqDB search
MTEEIKLSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFSAVRLIIPSLDRERGS
YGLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGM
ASGGLSVKELNDLLDRLASSENRGGKTSVLSTLIQKTNAQEMKWVIRIILKDLKLGMSER
CIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRISDVNAAW
KKLHGKDVVAECKFDGDRIQIHKNGTEIHYFSRNFLDHSEYAHAMSDLIVQNIIADKCIL
DGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHRQLCYVAFDVLYVGDTSVIHQSLKER
HELLRKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHSAADVERFFKETVENRDEGV
VLKDLGSKWEPGDRSGKWLKLKPEYVRAGSDLDVLIIGGYYGSGRHGGEVAQFLVGLADR
AEANVYPRRFMSFCRVGTGLSDEELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERP
DVWIESPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQAFVELV
NSSNGTTQKQKESESTQDNPKVIKSSKRGGEKKNVPHVPSQFIQTDVSDIKGKTSIFSNM
IFYFVNLPRSHSLDTFHKMVVENGGKFSMNLNNSVTHCIAAESSGIKYQAAKRQRDVIHF
SWVLDCCSRNNLLPLQPKYFLHLTDASRTKLQDEIDEFSDSYFFDLDLEGLKQVLSNAKQ
SEDSKSIEYYKKKLCPEKRWSCFIGCCIYFHLYSETLSNEEEALLGIMAKRLALEVLMGG
GKVSNNLAHASHLVVLSIAEDSLDFTSVSKSFSEKEKRLLLKRRLHVVSSNWLEDSLQRE
ERVCEEVYTLRPKSMEESDTEESDKAEHDTTEVASGVSAQTEELASSKMAVASSRGRSST
RAGNKRGRSSTNSVKRVQRRRGKQPSKIGGSETEESDAATEEKAATRLSDDIAEDSDDAQ
RNSRRGRSAKRGKSRVAQPQRVQRPRRGKKPLKIGGDDSEENDDFDDKKNDSADETKHRE
SLERDNTVSVEEASSQDSRNAKTEMDREEKIQIHEDPLQAMLMNMIPSLTLRNTSRTGEA
STANVCGESESSEKRKLGAETDNACVKNAEADEVPPVKKKKVSYRDVAGELLKDW
NT seq 3588 nt NT seq  +upstreamnt  +downstreamnt
atgacggaggagatcaaactcagcgtactagtgtctctcttcaactggattcagaagagc
aaaacctcatcccagaaacgctccaagttccgcaagttcctcgacacctactgcaaaccc
tccgattacttctccgccgtccgtctcatcatcccgtcgctcgaccgagagcgaggcagc
tacggcctcaaggagtctgtgctcgccacgtgtctcatcgacgccctcggaatctctcgc
gatgctcccgacgctgttcgccttctcaattggcgtaaaggaggaacggctaaggctgga
gccaacgccggaaacttctccttgattgctgctgaggtgctgcaacgtaggcaagggatg
gcgtctggtgggttgagtgttaaggagttgaatgatttgcttgatcgtttggcttcgagt
gagaacagaggggggaagacttctgttctttctacgctgattcagaagacgaatgcacag
gagatgaagtgggtcattaggatcattcttaaagacttgaagctggggatgagcgagagg
tgtatatttcaggagttccatccagatgctgaggacttgtttaatgtcacttgtgacttg
aaactagtctgtgaaaagctcagggatcgccaccaacgtcacaagcgccaggatatagaa
gttggaaaagccgtacgaccccagttagctatgcgtatcagtgacgtaaatgctgcttgg
aagaagctccatgggaaagatgtagttgctgagtgcaaatttgatggggatcgcatacag
atacacaaaaatgggactgaaatacattacttctctaggaacttccttgatcattctgaa
tatgcacatgccatgtctgatcttatcgtacaaaatataattgctgacaagtgtatcctt
gatggtgaaatgttggtctgggatacatcacttaatcggtttgctgagtttggttctaat
caggaaatagccaaagcagcaagggagggtctcgacagccatagacagttatgttatgtt
gcctttgatgtgctttatgttggcgatactagcgtcatccaccagagtttaaaagaacgg
catgaactcctgaggaaagtggttaagcctttaaaaggccggcttgaagttctagtgccc
gaaggtggtctcaatgttcatcgcccttctggagaaccaagttggtctattgtggttcat
tccgcagctgatgttgagcggtttttcaaagaaacagttgaaaatagagatgaaggagtt
gtgcttaaagacctgggatcgaaatgggaacctggagatcgtagtggcaagtggttgaag
ttgaagcctgaatatgtccgcgctggttctgatctagatgttcttataataggaggatac
tatggctctggccgtcacggaggagaggtagcacagtttctcgttgggttggctgaccgg
gcagaggcaaatgtatatcccaggcgatttatgtcgttttgtagagttggcacaggactt
tccgatgaagagcttaacactgttgtaagcaaactgaagccttatttcagaaaaaatgaa
cacccaaagaaggctccaccaagcttttaccaggtcacaaatcactcaaaagagagacct
gatgtttggattgaaagcccggaaaaatcaataatactctccatcactagtgacatcagg
acaataaggtctgaggtttttgtggcaccttacagcctcaggtttcctcggattgataaa
gtaagatacgacaaaccctggcatgaatgtctcgatgtgcaagcttttgtggaattggtt
aactcaagtaacggcaccacacagaaacagaaggaatccgaaagcacgcaggacaatccg
aaagtcattaaatcgtccaagagaggaggagagaaaaagaatgtgcctcatgtcccatct
cagtttattcaaactgatgtatcggatatcaagggcaagacctcaatcttctccaatatg
atattttattttgtaaacctgcctcggtcccattctcttgatacattccacaaaatggtg
gttgagaatggagggaagttctcaatgaacttaaacaattctgtgactcattgcattgca
gcggaaagcagtggaataaagtatcaggcagcaaaacgtcaaagagatgtcatccacttt
tcttgggtcttagattgttgttcacggaataatctgcttcctttgcagccaaagtacttc
ctccatctcactgatgcttcaaggactaaattacaggatgaaattgacgagttttccgat
tcttatttctttgatttagaccttgaaggtctcaaacaggtcttgagcaatgccaagcaa
tcggaagactcaaaatccattgaatactacaagaaaaagctatgtccggagaaaagatgg
tcctgcttcatcggttgctgcatttactttcacctctatagtgaaacattgagcaatgaa
gaggaagccctgttgggaatcatggctaagagattagcgcttgaagtcttaatgggtggt
ggtaaagtcagcaataatcttgctcatgcgtcgcaccttgtagtcctttctatagcagaa
gactctttggactttacttcagtttcaaaaagtttcagcgaaaaggagaaacgtcttttg
ctgaagagaaggctacatgttgttagctcgaactggttagaagacagcttgcaaagagag
gaaagagtatgcgaggaggtgtacactctgaggcctaagagtatggaagagtctgatact
gaagaatcagataaagctgaacatgatacaactgaagtagcttccggtgttagtgctcaa
accgaagagctagcttcctcgaaaatggcagttgcgagttcaagaggacggtcaagtact
agagctggtaataaaaggggaaggtcttctacaaactcagtgaaacgagtacagagacgc
agaggcaagcagccttctaagataggtggaagtgagacagaggagagtgatgcggctacg
gaagaaaaggctgcaacaagactcagtgatgatatagcagaagactctgatgatgctcaa
agaaactctaggagaggaagatctgcaaagagagggaagtctcgtgtggcacaaccccaa
agagtacagagaccaagaagaggcaagaagcctttgaagataggaggagatgactctgag
gaaaatgatgattttgatgacaagaaaaatgattctgccgacgagacaaagcacagagaa
tcactggagagagataacacagtatcagttgaagaggcctcctcgcaagattctagaaat
gcaaagaccgagatggatagggaagagaagatacaaatccatgaggatccattacaagct
atgttgatgaacatgatcccaagcctcactctgagaaacacaagccgaacgggcgaagct
agtacggctaatgtttgtggtgagagtgagtcttcagagaaaagaaaacttggcgccgag
actgataatgcttgtgtgaagaacgcagaggcagatgaagttcctcctgtgaagaaaaag
aaagttagctaccgcgatgttgccggagaactgctcaaagactggtga

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