Bipolaris sorokiniana: COCSADRAFT_352402
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Entry
COCSADRAFT_352402 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COCSADRAFT_352402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_352402
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
COCSADRAFT_352402
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
COCSADRAFT_352402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF3482
TFIIA
Motif
Other DBs
NCBI-GeneID:
19138152
NCBI-ProteinID:
XP_007697121
JGI:
Cocsa1_352402
UniProt:
M2SYS4
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MPPHGGRFPGHNLSNPFAHLSGPMPQQQQPLHQHQQQQQQQQQQNMQHFGAGNQATNLNL
FGQHQGGFQSNAGLGGGLGGAGLGAAAAIGGAGGGTGLDGHEARMRFAHGAQIQENAARG
HDGTKGIAGQRIRQVWRSNLHQEMDMLRTLIDQYPYISMDTEFPGVVARPIGDFNSKASY
HYQTVRCNVDLLKIIQLGVTLFNVQGDVPPTHLDTNTLTYKPKSFQRYSNNIIPCPCTWS
FNFQFSLEDDMYNEESIQMLKKSGADFEKHRDQGIDPQEFGSLLTTSGMTLSEDVNWISF
HSGYDFAYMLKMLTSKPLPEDEDTYRKLVNVFFPKLLDVKYLWRHANNLVRRGAIGATAT
NILNNLGTKSGLQDLADELGCQRIGNSHTAGSDAWLTGVVFWEMRKKIFDGSVPDEMSGH
MWGLTGVGAPASAAAQAAVLAAQGAPQGLSGFQQGVNNTFYPGNARHGVDGPSTPTNHPA
GLASNTPGPTGMMTPGAYSGYGNK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcatgggggccggtttcccggccacaacctctccaacccattcgcacatctc
tctggcccaatgccccagcagcaacagccattgcaccaacatcagcaacaacagcaacag
cagcagcaacagaacatgcagcactttggcgcgggcaaccaggccaccaatctgaatctc
ttcggccaacaccagggcgggtttcagtcgaatgctggcctgggcggcggcttgggaggc
gcgggtctgggggcagcagcagccattggcggggcaggtggaggcaccggacttgacgga
cacgaggcgcgcatgcggtttgcccacggcgctcaaatacaggagaatgcagcccgtgga
cacgacggtaccaagggaattgctggccagcgcatacgccaggtctggcgatccaacctg
catcaggagatggacatgctacgcaccctcattgaccagtatccatacattagcatggac
accgagtttcccggtgttgttgcgcgacccatcggagacttcaactcgaaagcatcatac
cactaccagaccgttcgctgcaatgtcgacctgctcaagatcatccagctgggcgtcacc
ctcttcaacgttcaaggcgatgttcccccaacacatctcgacacaaatactctgacctac
aagcccaagtcgtttcaaagatattcaaacaacattatcccctgcccttgcacatggtcc
ttcaacttccagttctccctggaagacgatatgtacaacgaagagtcgattcagatgctg
aagaagtcgggagctgatttcgaaaagcaccgcgaccagggcattgacccacaagagttt
ggctcgctactgacaacatctggaatgaccttatcagaggatgtcaactggatatcattt
cactcgggctatgattttgcatacatgctcaagatgcttacgtcgaagccgctacccgag
gatgaggacacgtatcgcaagctcgtcaacgtattctttcccaaacttctcgacgtcaag
tatctctggcgacatgcaaacaacctggttaggcgtggagccattggcgccacagcgacc
aacatactcaacaatctgggcacaaagtctggtctccaagatcttgctgatgaactcggc
tgccagcgcatcggtaactcacatacggctggttcagatgcttggttgacaggagttgta
ttctgggagatgaggaagaagatattcgatggatccgttcccgacgaaatgagtggccac
atgtggggtctcactggcgttggagccccagccagcgcagctgctcaagctgctgtgctc
gccgcgcagggtgcaccacagggcttgtctggcttccagcaaggcgtcaacaatactttc
taccctggaaacgcacgacatggtgtcgatggacctagtacgcctaccaaccatcccgca
ggccttgcatccaatacaccaggaccaactggcatgatgactcctggagcttacagcgga
tatggcaacaaatag
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integrated database retrieval system
