KEGG   Bipolaris sorokiniana: COCSADRAFT_36737
Entry
COCSADRAFT_36737  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSADRAFT_36737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bsc03041]
    COCSADRAFT_36737
   04121 Ubiquitin system [BR:bsc04121]
    COCSADRAFT_36737
Spliceosome [BR:bsc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    COCSADRAFT_36737
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    COCSADRAFT_36737
Ubiquitin system [BR:bsc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    COCSADRAFT_36737
SSDB
Motif
Pfam: SART-1 HIND CH_2
Other DBs
NCBI-GeneID: 19138810
NCBI-ProteinID: XP_007699782
JGI: Cocsa1_36737
UniProt: M2SA30
LinkDB
Position
Unknown
AA seq 683 aa
MVDLSIDEANKIRLSMGLPALPGGSASAAPAAPFGLDFKPAKDDDDSDGEPASTIDTRQA
AASDNWKKLEEERLAKIRREERAAAIKKERERASRFAKLEGKGLADEADVDDDLAWLKSS
KKRQKKIAKEEQMRKELEERERQALEAMQYTDKDLAGVKVGHELDEFDDEDQILVLKDTA
VDAEDEDELEAVALREKERLQERLDSKKRKRVYDPNDIDESGQKSILAQYDEEIDGKKSK
AFTLDGKGRTVEAIQAEAEGAAKPKKVAISLDILKEDAPANDYMDVSEVKMKKPKKKKSK
KSKRERVEDEDEMLAMPTEEPAVDDMEVDGGEATAPQQKKKKKKVFDESFVDDDDLQANL
AAQRQKALKKRKKMRPEDLARQLREEATTPQPDVLESTEDGDVGLVIDETTEFVQNLGAA
GDEEEEEEEARRKRRKSSHISEGTKSMGDIPVADEDGDVEMGQSYAEAAEAEDAQNRSVS
RALSTEITETGLEAEKTVDQGLGATLALLKQRGLVTESNAGEKNALYRERQKFMADKAKA
EAEAERQRKIVRERERNSARWNNMTPREREEWARKNNTSADMVESRRLAELFNKEYTPNI
ELKYVDEHGRQMNQKEAFKQLSHQFHGKGSGNTKTKKQLEKVAAEKKKMAESSLDSSRSG
GGGLGNAFDDQAKKKGTAGVRLQ
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggtcgacctatccatcgatgaggcgaacaaaattcgtctgtccatgggccttcccgcc
ctcccaggtggaagtgcttccgcagcgcccgcagcgccctttggtctcgatttcaagccc
gccaaagatgacgacgactcggacggagagcctgcaagcaccatcgatacgcgtcaggcc
gctgcctctgataattggaagaaactcgaggaagaaagattggccaagatcaggcgcgag
gagcgcgccgctgcaattaagaaagaacgcgagagggcgtcgcgctttgcaaaactcgaa
ggtaagggactggcagacgaagccgacgttgacgatgacttggcctggttgaagagtagc
aagaagcgccagaagaagattgccaaggaggaacagatgcgcaaggagcttgaggagcgc
gagcgtcaggcgcttgaggccatgcagtataccgataaagaccttgcgggtgtcaaagtt
ggacacgagcttgacgagttcgacgacgaggaccagattttggtgctcaaggacactgca
gtcgatgccgaagacgaagatgagcttgaggcggttgcgctgagagagaaggagcggcta
caagagcgactcgattcaaagaagcgaaagcgcgtttatgatcccaacgacatagacgag
tcgggccaaaagtcgattttagcacaatacgacgaggaaattgacggcaagaagagcaag
gctttcacactagatggcaagggccggactgtcgaggccatccaagctgaggctgaaggt
gctgcaaagccaaagaaggtcgccatcagtctagatatacttaaagaagatgcgcctgca
aacgactacatggatgtttcggaggtcaaaatgaagaaacccaagaagaagaagagcaag
aagtccaagcgggagcgtgtcgaagacgaggatgaaatgcttgctatgcctacagaggag
cctgcagtcgacgacatggaagttgatggtggagaagccaccgcaccacaacagaagaag
aagaagaagaaggttttcgacgaatcattcgtagacgacgatgatcttcaggcaaacctt
gcagcccagcgccagaaggccctcaaaaagcgcaagaagatgcgaccggaagacttggca
cgacaactgcgtgaagaagctaccaccccccagcctgacgtccttgaatctaccgaagac
ggagatgtcggattagtcattgacgagacaactgagtttgttcaaaatctgggtgcagct
ggtgatgaagaagaagaagaagaagaagcacgccggaaacgtagaaagtcgagccacatc
tccgaaggcaccaagtccatgggtgatattccagtcgctgatgaagatggcgatgtagag
atgggccaatcatacgctgaagcagccgaagcagaagacgcacagaaccgcagtgtctca
cgtgctctttctacggaaatcaccgaaacaggtctcgaggcagagaagactgttgatcaa
ggtctaggtgccacgcttgcactgctcaagcaacgagggctagtcaccgaatccaacgct
ggtgagaagaatgccttgtaccgtgaacgccagaagttcatggccgacaaggccaaggcc
gaggcggaagctgaacgtcaacgcaagattgttcgtgagcgcgagagaaattccgcccgt
tggaataacatgacgcctcgcgagcgcgaggaatgggcccgcaagaacaataccagcgcc
gacatggtcgaaagccgtcgtctcgccgaactctttaacaaggagtacacaccaaacatt
gagctcaagtatgtcgatgagcacggtcgtcaaatgaaccagaaagaggcgttcaagcag
ctcagtcaccaatttcacggcaagggcagcggtaacaccaagacgaagaagcagctcgag
aaggtggcggccgagaagaagaagatggccgagagttcgctcgattccagtcgaagcgga
ggcggtggtttgggcaacgcgtttgacgaccaggccaagaaaaagggtacggctggtgtc
cgcttgcaataa

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