KEGG   Blastococcus saxobsidens: BLASA_3097Help
Entry
BLASA_3097        CDS       T01752                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bsd  Blastococcus saxobsidens
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bsd00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BLASA_3097
Enzymes [BR:bsd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BLASA_3097
DNA repair and recombination proteins [BR:bsd03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BLASA_3097
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(2965064..2965969)
Genome map
AA seq 301 aa AA seqDB search
MRVDGRQLEVSNLDKVLFPEVSFTKAQVIDYYVRIAPVLLPHLSGRPVTFTRWPDGVEGQ
AFFEKNSARHAPEWVRKVTVPSPGSSKGRETLEMVILETVADLAWAANLAALELHVPQWQ
VGSTRQPALPDLLVLDLDPGPHTGITECCHLAERLRVRLVDDGLDPVVKTSGSKGMQVYA
PIRVGDRDHPSRYAKKLAQALTAETPDQVVWRMEKALRPGKVLVDWSQNNTAKTTVAPYS
LRARPDATVSTPIGWDEVDAVRDGADPGSLRFRTEEVLERVEEWGDLFDIADRRRARLPQ
G
NT seq 906 nt NT seq  +upstreamnt  +downstreamnt
gtgcgggtcgacgggcggcagctggaggtgtccaacctcgacaaggtgctcttcccggag
gtgtcgttcaccaaggcccaggtgatcgactactacgtgcggatcgcaccggtcctcctg
ccgcacctctcgggccggccggtgaccttcacccggtggcccgacggcgtggaggggcag
gcgttcttcgagaagaacagcgcccgacacgcgcccgagtgggtccgcaaggtcaccgtg
ccgagccctggcagctccaagggccgggagacgctggagatggtgatcctcgagacggtc
gcggacctcgcgtgggcggcgaacctcgcggcgctggagctgcacgtgccgcagtggcag
gtgggcagcacgcggcagccggcgctgcccgacctgctggtgctggacctcgacccgggc
ccgcacaccggcatcaccgagtgctgccacctggccgaacggctgcgcgtgcggctggtc
gacgacgggctggacccggtggtcaagacctcggggtcgaaggggatgcaggtgtacgcc
cccatccgcgtcggcgaccgcgaccatcccagccggtacgccaagaagctggcccaggcg
ctcaccgcggagacgccggaccaggtggtctggcggatggagaaggcactgcgccccggc
aaggtcctcgtcgactggagccagaacaacaccgccaagaccacggtggcgccgtactcg
ctgcgcgcccggccggacgccacggtctccacccccatcggctgggacgaggtcgacgcc
gtccgcgacggcgcggacccgggttcgctgcgcttccgcaccgaggaggtcctggagcgg
gtggaggagtggggcgatctgttcgacatcgccgaccggcgccgggcccggctgccccag
ggctga

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