KEGG   Burkholderia seminalis: WJ12_16950Help
Entry
WJ12_16950        CDS       T04851                                 

Definition
(GenBank) DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bsem  Burkholderia seminalis
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bsem00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    WJ12_16950
Enzymes [BR:bsem01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     WJ12_16950
DNA repair and recombination proteins [BR:bsem03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     WJ12_16950
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3:complement(245447..248242)
Genome map
AA seq 931 aa AA seqDB search
MAGKLDPYRRKRRFDASPEPEGAHGRRRVSADATTRTGRKARPAARAARPLRFVIQEHHA
RRLHYDFRLELDGTLKSWAVPKGPSVDPSVKRLAVHVEDHPLEYASFEGEIPAGHYGAGS
VVVWDAGTWTPDGGVAQARAGYRDGKLTFRLDGAKLHGGWALVRSGRQQGRQAQWLLIKE
RDDDARDAETFDVVAQRPGSVHDGHTRAARDPAPADAAPSVRASRRARRNASDTRGAAHD
AGLERPPTDLSQVDGAVRAALPERVAPQLATLVDAPPTHGDWRYEVKFDGYRILARIAGR
GARRHVTLMTREGRDWTAKLRLQRDALAALDVDNAWLDGEAVVLRDTGLPDFQALQNALG
AGRSDAVTLFVFDLPFLDGYDLRDAPLAARRRLLEPLLAGSDPARLRYSPDLGDDIASLI
ASACDTGLEGLIGKRADARYRGGRSPAWIKLKCRRRQEFVIGGYTEPSGSRHGFGALLLG
VHEPAAGGRRPRGTPPLRYVGRVGTGFDTRLLDRLAATLRKHERATTPFDPPPRERSRTR
VYWVEPTLVAECEFAEWTGDGIVRQAAFVALREDKPARQIVREVPRHTDTETTMDGPRTT
HDRHPPAAPADTAHGRPPRTRSDASAGRMQDESGVARVGRVRITHPDRVLDPQSGTRKID
LAHYWQRVAPWLLPDLKGRPVSLVRAPGDIAGELFFQKHAERREIPFVTQHEGLDPGHGP
LLSIDSVDALLGAAQMGTIELHTWNAHASNIERPDRIVFDLDPDPALPWREMIDAAQLVR
GLLDALGLVSFCKTSGGKGLHVVVPLTRHAGWDDVKAFSRAVAQHVAGTLPERFTATMGP
RHRRGKIFVDYLRNGRGASTIAAYSVRARPGMGVSVPLDWDEVPATTGGAQWTIDTLHER
LDTLKRDPWEDYAKTRQRVTAAMRARLGVQT
NT seq 2796 nt NT seq  +upstreamnt  +downstreamnt
atggcaggcaagctcgatccgtatcgccgcaaacgccgcttcgacgcgagcccggaaccc
gagggcgcgcacgggcggcggcgcgtttccgccgatgcgactacgcgcacggggcgcaag
gcacgaccggccgcacgcgcggccaggccgctgcgcttcgtgatccaggaacaccacgca
cggcgcctgcattacgacttccgtctcgagctcgacggcacgctgaagtcgtgggccgtg
ccgaaggggccgagcgtcgacccgtcggtgaaacggctggccgtgcacgtcgaggatcat
ccgctcgaatatgcgtcgttcgaaggcgagattccggccggccattacggcgcgggttcg
gtcgtcgtctgggacgcgggcacgtggacgcccgacggcggcgtcgcacaggcacgcgcc
ggctatcgtgacggcaagctgacgttccggctcgacggcgcgaagctgcacggcggctgg
gcgctcgtgcgcagcgggcggcagcagggccgccaggcgcaatggctgttgatcaaggaa
cgcgacgacgacgcgcgcgacgccgagacgttcgatgtcgttgcccagcggccgggcagc
gtgcatgacggacacacgcgggccgcgcgcgatccggcaccggccgacgcggcgccttcc
gtgcgtgcatcgcgccgcgcccggcgcaacgcgtcggacacgcgcggcgcggcgcacgac
gccgggctggaaaggccgcccaccgacctgtcgcaggtagacggcgccgtgcgtgcggcg
ttgcccgagcgcgtcgcgccgcaactcgcgacgctggtcgatgcgccgccgacgcacggc
gactggcgctacgaggtgaaattcgacggctaccggatccttgcgcggatcgcgggccgc
ggcgcacggcggcacgtcacgctgatgacgcgcgaaggccgcgactggaccgcgaagctg
cgcttgcagcgcgatgcgctcgcggcgctcgacgtcgacaacgcgtggctcgacggcgag
gccgtcgtgctccgcgacaccggcctgccggatttccaggcgctgcagaacgcgctcggc
gccgggcgctcggacgcggtgacgctgttcgtgttcgacctgccgtttctggacggatac
gacctgcgcgacgcgccgctcgccgcgcgtcgcaggctgctcgaaccgctgctcgccggc
agcgaccccgcgcggctgcgctactcgcccgatctcggcgacgatatcgcgtcgctgatc
gcgagcgcgtgcgacacggggctcgaggggctgatcggcaagcgcgcggatgcgcgctat
cgcggcggccgctcgcccgcgtggatcaagctgaaatgcaggcggcggcaggagttcgtg
atcggcggttataccgagccgtcgggcagccggcatggcttcggcgcgctgctgctcggc
gtccacgagcccgccgcgggcggcaggcggccgcgcggcacgccgccgctgcgttatgtc
ggccgtgtcggtaccgggttcgatacgcgcctgctcgaccggctcgcggccaccttgcgc
aagcacgaacgcgccacgacgccgttcgacccgccgccgcgcgaacggtcgcgcacgcgg
gtctactgggtcgagccgacgctcgtcgccgaatgcgaattcgcggaatggaccggcgac
gggatcgtgcggcaggcggcgttcgttgcgctgcgcgaagacaagccggcgcggcagatc
gtccgcgaggtgccgcgccacaccgacacggagacgacgatggatggaccccgcaccacg
cacgaccggcacccgcccgccgcgcctgccgacaccgcgcacggccgcccgccgcgtacg
cgctccgatgcgtcggccggccgcatgcaagacgaatccggtgtcgcccgggtcggccgg
gttcgcatcactcaccccgatcgcgtactcgatccgcaaagcggcacgcgcaagatcgac
ctcgcgcattactggcagcgggtcgcgccgtggctgctgcccgacctgaaaggacgaccg
gtatcgctcgtgcgcgcgccgggcgacatcgccggcgaactgttcttccagaagcatgcg
gagcgacgcgagatcccgttcgtcacgcagcatgaaggactcgatcccggccacgggccg
ctgctgtcgatcgacagcgtcgacgcgctgctcggcgccgcgcagatgggcacgatcgag
ttgcatacgtggaacgcgcatgcgtcgaacatcgagcggccggaccgcatcgtgttcgac
ctcgatcccgatccggcattgccgtggcgcgagatgatcgacgccgcgcagctcgtgcgc
gggctgctcgatgcgctgggactcgtgtccttctgcaagaccagcggcggcaaggggctg
cacgtcgtcgtgccgctcacgcggcacgcgggctgggacgacgtgaaggcgttctcgcgc
gccgtcgcgcagcacgtcgccggcacgttgcccgagcgcttcaccgcgacgatggggccg
cgccaccggcgcggcaagatcttcgtcgactacttgcgcaacggccgcggcgcgagcacg
atcgccgcgtactcggtgcgcgcgcggcccggcatgggcgtgtcggtgccgctcgactgg
gacgaggtgcccgcgacgacgggcggcgcgcaatggacgatcgacacgctgcacgaacgg
ctcgatacgctgaagcgcgatccgtgggaagactatgcgaagacgcgccagcgcgtcacc
gccgcgatgcgtgcgcggctcggcgtgcaaacgtga

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