KEGG   Bacillus subtilis subsp. subtilis 6051-HGW: BSU6051_14530
Entry
BSU6051_14530     CDS       T02503                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J1 RnjA
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bsh  Bacillus subtilis subsp. subtilis 6051-HGW
Pathway
bsh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSU6051_14530 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsh03019]
    BSU6051_14530 (rnjA)
Messenger RNA biogenesis [BR:bsh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BSU6051_14530 (rnjA)
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 SIS_2 DUF4453
Other DBs
NCBI-ProteinID: AGG60822
LinkDB
Position
complement(1523116..1524783)
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN
IIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRIIFATFASNIHRLQQ
VIEAAVQNGRKVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRMPANKVTILCTGS
QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPL
NDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE
VLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKI
SAGPDLISRGFVYMRESGDLINDAQELISNHLQKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaatgatcagactgctgttttcgccctcggaggtttgggcgaaatc
ggtaaaaatacgtacgcggtgcaattccaggatgaaattgtactgattgatgcggggatc
aagtttcccgaggacgaactgctcggaattgactacgtcatccctgattatacgtattta
gtcaaaaacgaagataaaattaaagggctttttatcacccacgggcacgaagaccacatc
ggcggtattccatacctgctcagacaagtgaatattcctgtatacggcggaaaactcgcg
atcggcttacttcggaataaacttgaagagcatggattattgagacagacgaaactgaac
attatcggcgaggatgatattgtaaagttccgcaaaacggctgtgtcattcttcagaaca
acacacagtattccggattcctacggcattgttgtaaaaacgccgcccggaaacatcgta
catactggggatttcaaattcgactttactccagtcggcgagccggcaaacttaacgaaa
atggccgaaatcggtaaagaaggcgttttgtgccttctttcagacagcacaaacagtgaa
aatccggagtttaccatgtctgagcgccgtgtaggagaaagcattcatgacattttccgc
aaggtggacggccgaattatcttcgccacatttgcgtcgaatattcaccgcttgcagcag
gtaattgaagctgctgtacaaaatggaagaaaagttgccgtatttggacgcagtatggaa
tcggctatcgaaattggacagacactcggttatattaactgtcctaaaaatacgtttatt
gagcataacgaaatcaatcgtatgcctgctaataaagtaacaattttatgtacaggaagc
caaggggaaccaatggcggcgttatcaagaattgcaaacggcacacaccgccaaatttca
atcaatcctggggatacagtcgtattttcttcatcccctatcccaggcaacacaatcagc
gtgagtcgaacaatcaaccagctgtatcgtgcgggtgctgaggttattcacggccctctt
aacgatatccatacatccggtcacggcggacaggaagaacagaagctgatgcttcgttta
atcaagcctaaattcttcatgccgattcacggtgagtacagaatgcaaaagatgcatgtc
aaacttgcaacagattgtggcatcccagaggaaaactgctttatcatggataatggtgaa
gtattagcacttaaaggcgatgaggcttcagttgcaggaaaaatcccgtccggttcagtg
tacattgacggaagcggtatcggtgatattggcaatatcgtacttcgtgatcgcagaatt
ctctctgaagaaggacttgtcatcgttgttgtcagcattgacatggacgacttcaagatt
tcagcgggtcctgatttgatttccagaggatttgtgtacatgagagaatctggtgacttg
atcaacgacgctcaagagctcatttcaaatcacttacaaaaagtaatggaacgaaaaacg
actcaatggtctgaaatcaaaaacgaaattacagacacgcttgcacctttcttgtacgaa
aaaacaaagcgccgtccaatgatcctgccgatcattatggaggtttaa

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