KEGG   Bacillus subtilis subsp. spizizenii W23: BSUW23_00545
Entry
BSUW23_00545      CDS       T01302                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bss  Bacillus subtilis subsp. spizizenii W23
Pathway
bss03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BSUW23_00545 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bss03021]
    BSUW23_00545 (rpoB)
   03400 DNA repair and recombination proteins [BR:bss03400]
    BSUW23_00545 (rpoB)
Enzymes [BR:bss01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BSUW23_00545 (rpoB)
Transcription machinery [BR:bss03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BSUW23_00545 (rpoB)
DNA repair and recombination proteins [BR:bss03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BSUW23_00545 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: ADM36167
UniProt: E0TZD9
LinkDB
Position
116233..119814
AA seq 1193 aa
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEILDLVGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQV
INVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGEN
TVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE
NT seq 3582 nt   +upstreamnt  +downstreamnt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcaccaattgaggatttcactggt
aacctctctcttgagttcattgattatagtttaggtgagcctaaatatcctgtagaggaa
tcaaaagaacgtgatgtgacttactcagctccgctaagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaagatgtcttcatgggtgatttcccgattatgaca
gatacaggtacttttatcattaacggtgcggaacgcgttatcgtttcccagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgca
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtt
tatgtccgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggttccgatcaagagattcttgatctcgtaggagagaacgagtacctgcgaaatacg
cttgataaagataacacagaaaacagcgacaaagcgttgctcgaaatttacgagcgtctc
cgtcctggagagccgcctacagtagaaaatgcgaaaagcttgcttgattctcgtttcttt
gatccgaaacgatacgatcttgccaatgtaggacgctataaaattaataaaaaacttcat
attaagaatcgcctctttaatcagagacttgctgaaacgcttgttgaccctgaaacagga
gaaatcctggctgaaaaaggtcagattctagatagaagaacactagataaagtactgcca
tacttagaaaacggaatcggtttcagaaagctgtatccgaatggcggtgttgttgaagat
gaagtaactcttcaatcgattaaaatctttgctccgactgatcaagaaggagaacaggtt
attaatgtaatcggcaatgcttacattgaagaagagattaaaaacattacgcctgctgat
attatttcttctatcagctacttcttcaacttgctgcacggagtaggcgacacagatgat
atcgatcatcttggaaaccgccgtttgcgttctgtaggtgagcttctccaaaaccaattc
cgtatcggtttaagccgtatggagcgtgtggttcgtgagagaatgtcaattcaagatacg
aatacaatcacacctcagcagttgatcaatattcgtcctgttattgcgtccattaaagag
ttctttggaagctctcagctttctcaattcatggaccagacgaacccgcttgctgaatta
acgcataagcgacgtctgtcagcattaggaccgggcggattgacacgtgagcgtgccgga
atggaagtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcct
gaaggcccgaacatcggtttgatcaactcactttcatcatatgcaaaagtaaaccgtttt
ggctttatcgaaacgccatatcgccgcgttgaccctgaaacagggaaggtaacgggaaga
atcgattacttaactgctgatgaagaggataactatgttgtcgctcaagcgaacgctcgt
cttgatgacgaaggcgcatttattgatgacagcatcgtagcccgtttccgcggggagaac
accgttgtttccagaaaccgtgtagattacatggatgtatcgcctaagcaggttgtttct
gccgcgacagcatgtatcccgttcctagaaaacgatgactccaaccgtgccctcatggga
gcgaacatgcagcgtcaggctgtgcctttgatgcagcctgaagcgccattcgtaggaact
ggtatggaatacgtatcaggtaaagactctggtgccgctgttatttgtaaacaccctggt
atcgttgaacgcgtagaagcgaaaaacgtttgggttcgccgttatgaagaagtcgacggt
caaaaagtaaaaggaaacctggataaatacagcttgctgaaatttgtccgctctaaccaa
ggtacgtgctacaaccagcgtccgatcgtaagtgtcggcgatgaagtggtaaaaggagaa
atccttgctgacggtccttctatggagcttggtgaacttgcacttggccgtaacgtaatg
gtcggcttcatgacatgggatggctacaactatgaggatgccatcattatgagtgaacgc
cttgtgaaggatgatgtttatacatctatccacatcgaagaatacgaatcagaagcacgt
gatactaaacttggacctgaagaaatcactcgcgatattccaaacgtcggtgaagatgcg
cttcgcaatcttgatgaccgcggaattatccgtattggggctgaagtaaaagacggagat
cttcttgttggtaaagtaacgcctaaaggcgtaactgaactgactgcagaagaacgcctg
cttcacgctatctttggtgaaaaagcccgcgaggttcgtgatacttcacttcgtgtgcct
cacggcggcggtggaattatccacgacgttaaagtcttcaaccgtgaagatggagacgaa
cttcctccaggtgttaaccagttagtacgcgtatatatcgttcagaaacgtaagatttct
gaaggggataaaatggccggtcgtcacggtaacaaaggtgttatctctaagattcttcct
gaagaggatatgccttaccttcctgacggcacaccaattgatatcatgcttaacccgctg
ggcgtaccatcacgtatgaacatcgggcaggtattggagcttcatatgggtatggccgct
cgttacctcggcattcacattgcatctcctgtatttgatggagcgcgagaagaggatgtt
tgggaaacacttgaagaagccggcatgtctcgtgacgccaaaacagtgctttacgacgga
cgtactggagagccatttgataaccgcgtatctgtcggtatcatgtacatgatcaaactg
gctcacatggttgacgataaacttcacgcacgctctacgggtccttactcacttgttaca
cagcagcctcttggcggtaaagcgcaatttggcggacagcgtttcggtgagatggaggta
tgggcacttgaagcttacggtgcggcttacactcttcaagagattctgactgtgaagtct
gatgacgtggttggacgtgtgaaaacatacgaagccatcgttaaaggcgataatgttcct
gaaccaggtgttccggaatcattcaaagtattaatcaaagaacttcaaagcttaggtatg
gatgtcaaaatcctttctggtgatgaagaagaaatagaaatgagagatttagaagacgaa
gaagatgcgaaacaagctgatggcctggcattatcaggtgatgaagagccggaagaaaca
gcatctgcagacgtcgaacgagatgtagtaacaaaagaataa

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