KEGG   Bacillus subtilis XF-1: C663_1783
Entry
C663_1783         CDS       T02459                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein
  KO
K03666  host factor-I protein
Organism
bsx  Bacillus subtilis XF-1
Pathway
bsx02024  Quorum sensing
bsx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C663_1783 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C663_1783 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsx03019]
    C663_1783 (hfq)
   03036 Chromosome and associated proteins [BR:bsx03036]
    C663_1783 (hfq)
Messenger RNA biogenesis [BR:bsx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     C663_1783 (hfq)
Chromosome and associated proteins [BR:bsx03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    C663_1783 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AGE63575
UniProt: A0AA86DIG1
LinkDB
Position
1866605..1866826
AA seq 73 aa
MKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAIS
TFAPQKNVQLELE
NT seq 222 nt   +upstreamnt  +downstreamnt
atgaaaccgattaatattcaggatcagtttttgaatcaaatccggaaagaaaatacgtat
gtcactgtttttttgctgaacggctttcagttgcggggccaggtgaaaggctttgataac
tttaccgtattgttggaatcggaaggtaagcagcagcttatatataaacatgcgatctca
acgtttgcgccgcaaaaaaacgtccagcttgaactcgaatag

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