Bos taurus (cow): 784123
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Entry
784123 CDS
T01008
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X5
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
784123 (SRRM1)
03015 mRNA surveillance pathway
784123 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
784123 (SRRM1)
03041 Spliceosome [BR:
bta03041
]
784123 (SRRM1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
784123 (SRRM1)
Spliceosome [BR:
bta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
784123 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
784123
NCBI-ProteinID:
XP_002685753
BGD-bta:
BT26265
Ensembl:
ENSBTAG00000013772
VGNC:
35294
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All DBs
Position
2:complement(128253269..128282578)
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AA seq
901 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKTEPVLEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKEASP
RGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRK
GSSPSRSAREARSPQPNKRHSPSPRPRAPQTSSPPPARRGASLSPQRRQSPSPSSRPIRR
VSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPA
VPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAA
AVTPAAVAAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPQ
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaattcgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattcgaaaatgatgcaaatcaacctgaccgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctactcttaagtgcacaagaaaacatcgctgggatccct
tctgctttcctagaactgaagaaggaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaagaagaaaaagaa
agcagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttctcctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaaaagccggagtccttcccctgctccagagaagaaggaaaaaact
ccagagctccccgagccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
acgagtgacatcctgaaagttcccaagactgaaccagtactagagcctaaagaaccttct
ccagagaaaaactccaaaaaggaaaaggaaaagacccgaccaagatctcggtcacgttcc
aagtcaagatccaggacacgttctcgctctccttctcatactagaccaagaaggcgccat
agatctcgatcaagatcatactcacctagaaggcggccaagcccaagaagacggccatct
cctcgaagaagaaccccgccgagacgaatgcctcctccaccaaggcacaggaggagtaga
tctccagtgagacgaagaaggcgttcatcggcatccttgtctgggagtagttcatcatca
tcttcatctcgttcccggtcaccgccaaagaagcctccgaagaggacatccagccctcct
cgaaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcataggccatca
cctccagctactccgccgccaaaaactcgtcattccccaacaccccagcagtcaaaccgt
acaaggaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgacaaaacat
aaaggtactgagaaaagagaatccccttcaccagcaccgaagcctcggaaagtagagttg
tctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcagcagaga
cgccagtatagacgacagaaccagcagtcttcatctgattctggctcctcctcttcctca
gaagatgaacgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcgacggaga
cattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagaggcttcccct
cgtggtagacggaggagaagtccctccccacctcccgccagaaggcgacgttctccttct
cctgctcctccacctcgtcgacgcaggtctcccacaccaccaccacgacgaaggactccg
tctcctcctccacgccgtcgctcaccttccccaagaagatactctcctccgatacagagg
agatactctccttctccacctccaaagagaagaacggcttcgccccctccccctcctaaa
cgaagggcatcaccatctccaccaccaaagcgtcgggtctcccattcaccacctcccaaa
caaagaagctccccagtcaccaagagacgttcgccttcattgtcatcaaagcataggaaa
gggtcttccccgagccgatctgcccgggaggcccggtcaccacagccaaacaaacggcat
tcgccctcaccacggcctcgcgctcctcagacctcaagtcctccacctgctcgaagagga
gcatcattgtcaccccaaagaaggcagtccccatctccaagttctaggcccattaggaga
gtctccaggactccggaacccaaaaagataaaaaaagctgcctcaccaagccctcagtcg
gtaaggagggtctcatcttcccgatctgtctcgggatctcctgagccagcagctaaaaag
cccccagcacctccgtcacctgtccagtctcagtcaccctccaccaactggtcaccagcg
gtaccggttaaaaaggctaaaagcccaacaccaagcccatcaccggcaaggaattcagac
ccagaaggaggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataag
aagcacaagaagcacaaaaaacacaagaaggagaaggctgtagctgccgctgctgcagcc
gctgtgacccctgcagctgtagctgctcccacaaccacatcagcacaggaagaaccggag
gcagagccagagcctaagaaggagactgaaagtgagcctgaagataaccttgatgactta
gaaaagcacctgcgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacag
tcctag
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