Bos taurus (cow): 787488
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Entry
787488 CDS
T01008
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X3
KO
K15195
AF4/FMR2 family member 3
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bta03021
]
787488 (AFF3)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
787488 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
Gal_Lectin
Motif
Other DBs
NCBI-GeneID:
787488
NCBI-ProteinID:
XP_002691193
Ensembl:
ENSBTAG00000012449
VGNC:
59202
LinkDB
All DBs
Position
11:complement(4657734..5289471)
Genome browser
AA seq
1382 aa
AA seq
DB search
MAPQKGARAAGSSLLVALALLWVRGGWLHAWWGNAIGWFSHSPPHFHILYQHLHTSVVTT
CTLPVYTESAIQKACQGEGSCTLSLRRKTLNNLIWEKKKKSVCVESARAARSSAAAATAA
TAAAALTPPTMDSFDLALLQEWDLESLWGEDILNQRNDSLVVEFQSSASRCRSVYEPDRN
VLRRKERERRNQEAQQDDGAFNSSYSLFSEPYKTNKGDELSNRLQNTLGNYDEMKDFLTD
RSNQSHLVGVPKPGVPQAPVTKIDEHFVADSRAQTQPASVCSTTSSTPAAVPGQQSKRGA
MGWQKAGHPPSDGQQRATQQGTLRTLLGDGVGRQQPRTKQVCNVEVGLQTQDRPPAMGAK
HSGNGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSSAETGVHCLYRG
VPATKSESARAKAKLSKFSIPKQGEESRSGETNSCVEEIIREMTWPPALAAIQPPGKVEP
SKFPFPNKDSQLASSGHNNPKKGDAEPESPDNGTSNTSMLEDDLKLSSDEEENEQQAAQR
TALHALSDSAGLQPADCRASAPSSKGSSSGSSSSGSSSSSDSESSSGSDSETESSSSESE
GSKPPHYSSPEAEPASSNKWQLDKWLNKVNHHKPPVLIQNESHHGPESSQYYTPVKEDTQ
DCGKLPDVCPPGLRDKDIKGACKEEQRPRTANKAPGSKGVKQKSPPAAVAVAVTAAAAPP
PAVPGAPAESAPAPARRSAGKKPTRRTERTSAGDSGHRPEEPVAAEALGASTGVPPEPPK
PRPCGNSRTNHRKELRSAVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSSDSDLESEQE
DYPLSKAVAAAAAAAAASGNDPRLKEAPSSISGGGPRAPVGSINARTTSDIAKELEEQFY
TLVPFGRNELLSPLKDSDEVRSLWVKIDLTLLSRIPEHLPQEPGVLSAPAAKDSESAPPS
HASEAPVEKTLPKSKRKRKCDNEDDYREIKKAPGERESASRLSASANSTLSANHCSMNIN
SLAIPINKNEKVLRSPISPLSDASKHKFSGEDLTSSSRSNSNGLFTSTSSSKKHKAESQL
QSHAADLTKAAHNNSENILHKSRPQTEPWSPGSNGHRDCKRQKLIFDDMPRSADYFMQEA
KRMKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMR
LKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAP
SPWGASGKSTGTPSPMSPNPSPTGSVGSQGSLSNSNALSPSTIVSIPQRIHQMAANHVSI
TNSILHSYDYWEMADNLAKENREFFHDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSAH
LA
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggccccccagaagggggcccgggctgctggttccagccttctggtcgcccttgctctg
ctgtgggtgagaggaggctggctgcatgcctggtggggaaacgccattggctggtttagt
cactcgcctccacactttcacatcctctatcaacacctgcacacttcagtggtgaccaca
tgcactcttcctgtttatacggaaagtgccattcagaaagcttgccagggagaagggagc
tgcaccctcagcctcagaaggaagacgttgaacaacttaatttgggagaaaaagaaaaag
agcgtgtgtgttgagagcgcgcgggcggcccgatcctcggcggcggcggcgacggcggcg
acggcggcggcggcgctgacacctcccaccatggacagcttcgacttagccctgctccag
gaatgggacctcgagtcgctgtggggtgaagacatcctaaaccagaggaatgactctcta
gttgtggagtttcagtcatcagccagcagatgcaggagtgtctacgaaccggatagaaac
gtgttacggaggaaagaacgagaaagaagaaaccaggaagctcagcaggacgatggcgcg
tttaattcgagttactccctctttagtgaaccctacaagactaacaagggggatgagctc
tccaaccggctccagaacactttaggcaattacgatgaaatgaaagactttctcacggat
cgatcaaaccagagtcatcttgtgggtgttcccaaacctggggttcctcaggctcccgtg
accaagattgatgaacattttgtggcagattcaagagcccagactcagccagcatccgtc
tgtagcaccacatcctccaccccagcagccgtccctgggcagcagagtaagcggggtgcc
atgggctggcagaaggctgggcacccgccgtccgatggccaacagagagcaacacaacag
ggcactctcaggaccttgcttggcgatggcgttggcagacagcagccgcggaccaaacag
gtgtgcaatgtcgaggtgggtcttcagacccaggacaggccccctgctatgggagccaag
cacagcggcaatggccactgcgtgcagaactttcctccctccctggcttcgaaacccagc
cttgtccagcagaagcctactgcctatgtgcggcccatggatggccaagatcaggcgccc
gatgagtctccgaagctaaagtcgtctgcagagactggcgtgcactgcttgtacaggggt
gtcccggccaccaagtcagagtcagccagagccaaggccaagctctccaagttcagcatc
cccaaacaaggagaggagagtcgatctggagaaaccaacagctgtgttgaagaaatcatt
cgggagatgacctggcctccagcacttgctgctattcaaccacctggcaaagtggaacca
agcaaatttccatttccaaataaggactctcagcttgcctcctctggacacaataatcca
aagaaaggtgatgccgagccagagagtccagacaatggcacatcgaacacatcaatgcta
gaagatgaccttaagctaagcagcgatgaagaggagaatgaacagcaggcagcccagaga
acggccctccatgctctgtctgacagtgccggactccagccggccgactgcagggcctcc
gcaccctcgagcaagggcagcagcagcggcagcagcagcagtgggagcagctcctccagc
gactcggagagcagctcggggtccgactcggagacagagagcagttccagcgagagcgag
ggcagcaagcctccccactactccagtcccgaggcggaaccagcgtcctctaacaagtgg
cagctggataaatggctaaacaaagtgaatcaccacaagccccctgtcctgatccaaaat
gaaagccaccacgggccggagagcagtcagtactacaccccagtgaaggaggacacgcag
gactgcgggaagctccccgacgtctgcccgcccggcctgagagacaaggacatcaagggc
gcctgcaaggaggagcagaggcccaggaccgcgaacaaggcccccgggagcaaaggggtg
aagcagaagtccccgcccgcggccgtggccgtggccgtgaccgccgccgccgccccgccg
cccgcggtgcctggtgcgcccgccgagagcgcgcccgcacctgcccggaggtccgcgggc
aagaagcccacccggcgcaccgagaggacctcggccggcgacagcggccaccggcccgag
gagcccgtagctgccgaggcgctgggggcgagcacgggggttcccccggagccccccaag
ccccggccttgcggcaacagcaggaccaaccaccgcaaggagctgcgctcggccgtgacc
tgcgagaagcgccgcactcgggggctgagccggatcgtccccaagtccaaggagttcatc
gagacggagtcgtcctcttcctcctcctcctcggactcggacctggagtcggagcaggag
gactaccctctgtccaaggccgtggccgccgccgccgccgctgccgctgcctccgggaac
gacccaaggctgaaggaggctcccagcagcatcagcggcggcggcccccgcgctcccgtg
ggctccatcaacgccaggaccaccagcgacattgccaaggagctggaggagcagttctac
acactggtccccttcggccgcaacgagcttctctccccgttgaaggacagtgacgaggtc
cggtcactctgggtcaaaattgacttgacacttctgtccaggatcccggaacacctgccc
caggagccgggggtcttgagtgctccggcagccaaggactctgagagcgcgcccccgagc
cacgcatcggaggcgcccgtggaaaagaccttgccaaaatccaagaggaaacgcaagtgt
gacaacgaagacgattacagggagatcaagaaggccccgggagagagggagagcgcctca
cgactgagcgcctctgccaacagtactttgtctgcaaatcattgcagcatgaacatcaac
agcttggcaataccaataaataaaaatgaaaaagtgctccggtcgcccatctcacccctc
tccgacgcatctaaacacaaattctccggcgaggacttgacttcctccagcagatccaac
agcaacggtctgttcacctccacctcctccagcaaaaagcataaggcagagagccagctg
cagagccacgccgcggacctcacgaaagcggctcacaacaattccgaaaacattctccac
aagtcacggccgcagacagagccctggtctccaggctccaacggccaccgggactgcaag
aggcagaaactcatcttcgacgatatgccacgcagtgcagattattttatgcaagaagct
aagcgaatgaagcataaagcagatgcgatggtggaaaagtttggaaaggctctgaactat
gcagaagcagccttgtcattcattgagtgtggaaatgccatggaacagggccccatggag
tccaaatctccttacaccatgtattcagagacagttgagctcatcaggtatgccatgaga
ctaaaaacccactcaggtcccaatgccacaccagaggataaacagctggctgcattatgt
taccgatgcctggctctcctgtactggaggatgtttcgactcaaaagggatcacgctgta
aagtattcaaaagcacttatcgactatttcaagaattcatctaaagctgcccaagcccca
tctccatggggggccagtggaaagagcactgggaccccatcccccatgtctcccaatccg
tcccccaccggctccgtgggctctcaggggagcctgtccaacagcaacgccctgtcccca
tccaccatcgtcagcatcccgcagcgcatccaccagatggcggccaatcacgtgagcatc
accaacagcattctccacagctacgactactgggagatggcagacaacctggccaaggaa
aacagagaattcttccacgacctggacctgctcatggggccggtcaccctgcacagcagc
atggagcacctggtccagtactcccagcagggcctgcactggctgcgaaacagcgcccac
ctggcctag
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