Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_24235
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Entry
YBT1520_24235 CDS
T03435
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bthr
Bacillus thuringiensis serovar kurstaki YBT-1520
Pathway
bthr03030
DNA replication
bthr03410
Base excision repair
bthr03420
Nucleotide excision repair
bthr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YBT1520_24235
03410 Base excision repair
YBT1520_24235
03420 Nucleotide excision repair
YBT1520_24235
03440 Homologous recombination
YBT1520_24235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthr03032
]
YBT1520_24235
03400 DNA repair and recombination proteins [BR:
bthr03400
]
YBT1520_24235
Enzymes [BR:
bthr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YBT1520_24235
DNA replication proteins [BR:
bthr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YBT1520_24235
DNA repair and recombination proteins [BR:
bthr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YBT1520_24235
NER (nucleotide excision repair)
GGR (global genome repair) factors
YBT1520_24235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
DNA_pol_P_Exo
HHH
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
AHZ53426
LinkDB
All DBs
Position
complement(4642656..4645289)
Genome browser
AA seq
877 aa
AA seq
DB search
MEKKVVLVDGNNIAYRAFFALPLLNNDKGIHTNAIYGFTMMLMRILEEEKPTHMLVAFDA
GKTTFRHKTYSEYKGGRQKTPPELSEQFPFIREMLDAFNVPRYELENYEADDIMGTLAKE
ASEQGASVKVISGDKDLLQLVSDNTLVCIPRKGITEVDEYTKEALFEKYSLSPKQIIDMK
GLMGDQSDNIPGVPGVGEKTAIKLLTQFGTVEAVYENIDQVSGKKLKEKLEENKEQALMS
KDLATIITDAPITVRVDDMAYKGYEASDVIPMFESLGFTSLLNKLGVTPEETAPAELDDI
TFDIVEEVTEEMLQQDSALIVEVQEDNYHKADIQGFGIQNENGCYFIQTDIALKSDAFKE
WLADGEMRKHTFDAKRAIVALKWNGIDMQGIDFDLLIAAYLLDPADTDKDFRTVAKMKET
HAVKSDEEVYGKGAKRAVPKLEVVAEHVARKVHVLYDVKQTFVEELKKNEQYELFTELEL
PLARVLADMEVKGVKVDTERLRNMGEELAGRLKEMEQEIYKLAGTEFNINSPKQLGVILF
ENLNLPVIKKTKTGYSTSADVLDKLMNHHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDS
SKIHTRFNQVLTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEEGWIMYAADYSQIEL
RVLAHIANDKGLVEAFQHDMDIHTKTAMDVFGVKKDEVTSNMRRQAKAVNFGIVYGISDY
GLSQNLGITRKAAAEFIEKYLESFPGVQEYMEDIVKDAKQKGYVATLLNRRRYIPEITSR
NFNLRSFAERTAMNTPIQGTAADIIKKAMIIMADRLEEEGLQARLLLQVHDELIFEAPKE
EIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaaggtcgtattagtagatggtaataatatcgcgtatcgtgcattctttgca
ctaccgcttttaaataacgacaaaggtatacatacgaacgcaatttacggttttacaatg
atgttaatgagaatattagaggaagaaaagccaactcatatgttagtggcgtttgatgca
ggcaaaacaacgttccgtcataaaacgtatagtgagtataaaggagggcgtcaaaagact
ccacctgaattatcagagcagttcccgtttattcgtgagatgctggatgcgttcaatgta
ccgcgttatgaattagaaaattatgaagcggatgacatcatgggaacgttagcgaaagaa
gcgagtgagcaaggggcaagtgtaaaagttatttcaggagataaagatttacttcaactt
gtttctgataacacgcttgtatgtattccgcgaaaagggattacagaagtggatgaatat
acgaaagaagctttatttgaaaaatacagcttatcaccaaagcaaattatcgatatgaaa
ggtttaatgggagaccagtcagataatataccgggtgtaccaggagttggtgaaaaaacg
gcaattaaattgttaacacagtttggaacggttgaagcggtgtatgaaaatatagatcaa
gtaagtgggaagaaattaaaagaaaaactggaagaaaataaagaacaagctcttatgagt
aaggatcttgcaactattattacagatgcgccgattacagttcgtgtggatgatatggcg
tataaaggatatgaagcaagtgatgtcattccaatgttcgagagtttaggatttacatcc
cttttaaataaattaggcgttacgccagaagaaactgctccagctgaattagatgatatt
acatttgatattgtggaagaagttacagaagaaatgcttcagcaagatagtgcgcttatc
gttgaagtacaagaagataactatcataaagcagacattcaaggtttcggtattcaaaat
gaaaatggatgttactttattcagacagacattgctcttaagtcagatgcttttaaagag
tggcttgcagatggagaaatgagaaagcatacatttgatgcgaagcgtgcaatcgttgca
ctgaaatggaatgggatagatatgcaagggattgactttgatctattaatcgctgcttat
ttacttgatccagctgatacggataaagacttccgtactgtagcgaaaatgaaagaaacg
catgctgtgaaatctgatgaagaagtttacggaaaaggtgcgaagcgtgctgttccaaag
ttagaggtagtagcggagcatgtggctcgtaaagtgcatgtattatatgatgtaaagcaa
acattcgttgaagagttaaagaagaatgagcaatatgaactgtttacagagttagaattg
ccgcttgcacgtgtattagctgatatggaagtaaagggtgtaaaagttgatacagagcgt
cttcgtaatatgggagaagaacttgcgggtagattaaaggaaatggaacaggaaatttat
aagcttgcgggaacagaatttaatattaattcaccgaagcagcttggtgttattctgttt
gagaacttaaacttgccggttattaaaaagacgaaaacaggttattctacgtcagctgat
gtactagataagcttatgaatcaccatgaaattattccaaatattttacattatcgtcaa
ttagggaaactaaattcaacttacattgaaggtttgctgaaagttgtacatgaagattca
tctaaaattcatactcgctttaatcaagtgttaacgcaaacaggtcgattaagttcaacg
gatccgaacttgcaaaatatcccaattcgattagaagaaggaagaaagattcgtcaggca
tttgttccgtcagaagaaggatggattatgtatgcggctgattactcacaaatcgaactg
cgtgtattagctcatattgcaaatgataaagggctagttgaagcattccaacatgatatg
gatattcatacgaaaacagctatggatgtatttggcgttaaaaaagatgaagtaacttca
aatatgagacgacaagcgaaagctgttaatttcggaattgtatatggtattagtgattat
ggtctttcacaaaacttaggaattacaagaaaagcagcagcggaatttattgaaaagtat
ttagaaagtttccctggtgtacaagaatacatggaggacatcgtaaaagatgcgaaacaa
aaaggatatgtggctacattattaaatcgtcgccgttatattccagaaattacgagtcgt
aatttcaatttacgtagcttcgctgagcgtacagcgatgaatacaccaattcaaggtact
gccgcagatattattaaaaaagcgatgattattatggcggatcgtttagaagaagaagga
ttacaagcacgtcttcttctgcaagtacacgatgaattgatatttgaagcgccaaaagaa
gaaattgaaaaattagagaagcttgtacctgaagtaatggagcatgcaattgaacttgca
gttccgctgaaagttgattattcttacggtccaacttggtacgacgcaaaataa
DBGET
integrated database retrieval system