Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch1089
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Entry
H175_ch1089 CDS
T02474
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch1089
Enzymes [BR:
btht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H175_ch1089
DNA repair and recombination proteins [BR:
btht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H175_ch1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_12
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGF99801
UniProt:
M1Q594
LinkDB
All DBs
Position
1156345..1160070
Genome browser
AA seq
1241 aa
AA seq
DB search
MIENWPKKPEGSQWTDDQWKAVVANGRDILVAAAAGSGKTAVLVERIIKKIINEENPVDV
DRLLVVTFTNAAAQEMKNRIGEALEKVLIDEPGSQHVRKQLSLLNKASISTIHSFCLQVI
RGYYYMLDVDPRFRIANQTENELLKEEVLDDILEEEYGIEDNTIFFELVDRYTSDRSDDD
LQRMILALHTESRAHPNPEKWLDKLVEAYDVEGKTIEDLVYASYLLEDVKFQLETAEQHI
RKATELAMLPDGPAPRIETLQADVVLLGTLSSAARESWTSLYEAMQNVSWQTLKRIKKSD
YNEDVVKQVDSLRNKAKDEVKKLQEELFSRKPESFLRDFQDMHPVLEKLVQLVKVFTERF
QAMKRDKGMVDFTDLEHFCLQILSEQSENGEMNPSAVALQYRNKFAEVLVDEYQDTNFVQ
ESIIKFVTKDSESEGNLFMVGDVKQSIYRFRLAEPGLFLGKYKRFTQEGSGGGMKIDLAK
NFRSRHEVLAGTNFIFKQIMGEEVGEIDYDADAELKLGASYPEGEDVAAELLCIQQTEEE
VIDGEEGAEVEKAQLEARLMAQRIKAMVDSGYEVYDRKTDSMRPVQYRDFVILLRSMPWA
PQIMEELKLQGIPVYADLATGYFEATEVNIMMNVFRVIDNPMQDIPLAAVLRSPIVGLND
EDLATLRAHGKKGSFYEVMSSFLKGAPLEEEQELHDKLEWFYNLLQGWREFARQQSLSDL
IWKVYGETGYYDFVGGLPAGKQRQANLRVLYDRARQYEATSFRGLFRFLRFIERILERGD
DMGTARALGEQEDVVRIMTIHKSKGLEFPVVFVAGLGRRFNTQDLMKRFLLHKDFGFGSQ
FIDPRKRIKYTTLSQLAIKRKMKMELIAEEMRVLYVALTRAKEKLILIGTVKDANKEMEK
WLDAREHSEWLLPDHIRAGASCYLDWIAPSLYRHRDSEMLLELGQGSIPDEIYGYDTSWK
VEVVDGNTLLAPEPVQEEKQELLEALREKKAVPLQSERKEEVYDRLLWKYGYEDATSHRA
KQSVTEIKRNYQSEEGSDNAFIKKLRVPIKTRPRFMEKKGLTYAERGTAVHAVMQHVDLK
KPITAETLQEQIAGMVNKELLTFEQAEEIAIEKVISFFDSDLGKRVLAAKSVEREVPFTM
MLAAEEAYQDWQGKSEETILVQGVIDCMIEEEDGITLIDFKTDTIEGKFPGGFEQAKPIL
EDRYKVQLSLYAKALEKSLQHPVKEKCLYFFDGNHVVNIEE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaattggcctaaaaaaccagaaggtagtcaatggacagatgaccagtggaaa
gctgttgtagcgaacggacgtgatattttagttgcggctgcagctggatcagggaaaaca
gcagtattagttgaacgtattattaaaaagattattaatgaagagaacccagtcgatgtc
gaccgcctgctcgttgtaacatttacgaatgcagcagcgcaagagatgaaaaaccgaatc
ggggaagcgttagaaaaggtattaattgatgaaccaggctctcaacacgtaagaaagcag
ctgagcctattaaataaagcttccatttcaacaattcactcattctgtttacaagttatt
agaggatattactacatgcttgatgttgatcctcgtttccgtattgcgaatcaaacagaa
aatgaattgttaaaagaagaagtgttagatgacatattagaagaagagtatggcatcgaa
gataatacgatattctttgaactcgttgatcgttatacgagtgaccgtagtgatgatgac
ttacaacgtatgattttagcgcttcatacagaatcaagagcgcatccaaatccggaaaaa
tggcttgataaattagtagaagcatatgacgtagaaggaaagacaattgaggatttagta
tatgcttcttatttattagaagatgtgaaattccagcttgaaacagcggaacagcatatt
cgtaaggcaactgaactcgcgatgcttcctgacggtccagcgcctcgcattgaaactctg
caagcagatgtagttttacttggaacgctatcatcagctgctcgtgagtcgtggacaagt
ttgtatgaagcgatgcaaaacgtatcgtggcaaacgttaaagcgtattaagaaaagtgat
tacaatgaagatgttgtaaaacaagtagactctcttcgtaataaagcgaaagatgaagtg
aagaaattacaagaagagttatttagccgcaaacctgaaagtttcttacgagattttcaa
gatatgcacccagtattagaaaagcttgttcaacttgtaaaagtatttacagagcgtttc
caagcgatgaagcgagataaaggaatggtcgatttcacagatttagagcatttctgttta
caaattttaagtgaacaaagtgaaaatggtgaaatgaatccttcagcagtagcgcttcaa
tatcgtaataaatttgctgaagtgttagtcgatgaatatcaagatacgaactttgtacag
gaatccattattaaatttgtaacgaaagattctgagagtgaaggaaacttgttcatggtt
ggcgacgtaaagcagtcaatttatcgttttcgactagccgaaccaggcttattcctagga
aagtataaacgctttacgcaagaaggatcgggcggcggaatgaagattgacttagcgaaa
aatttccgtagtcgtcatgaagtgctagcaggaacgaacttcatcttcaaacaaattatg
ggcgaagaagttggggaaatcgattacgatgctgacgctgaattaaagctaggtgctagc
tatccagaaggtgaagatgtagcggcagagctattatgtattcagcaaacggaagaagaa
gtaatagacggtgaagaaggtgcagaagtcgaaaaagcacagctagaagctcgtcttatg
gcgcagcgtattaaagcgatggttgattcaggttatgaagtgtatgatcgtaaaacggat
agtatgcgccctgtacaataccgtgatttcgttattttactccgctcgatgccgtgggcg
ccgcaaattatggaagagttaaaattgcaaggaattccagtatatgctgaccttgcgacg
ggttattttgaagcgacagaagtaaatattatgatgaacgtattccgcgttattgataat
ccgatgcaagatattccgcttgcagctgtacttcgttcaccgattgtgggactaaatgat
gaagaccttgcgacgcttcgtgctcatgggaagaaagggtcattttatgaagtaatgagc
tcgttcttaaaaggagcaccgcttgaagaagagcaagaacttcatgataaattagagtgg
ttttataatttactgcaaggatggcgtgaatttgcccgtcaacaatccctttctgattta
atttggaaagtgtacggtgagacaggttattacgacttcgttggcggtttaccagcagga
aagcaaagacaagcaaacttacgcgtactatatgaccgtgcaagacaatatgaagcaaca
tcatttagaggattattccgcttcttacgttttattgaacgtattttagaacgcggtgat
gatatgggtacggcgagggctctcggtgaacaagaagacgttgttcgcattatgacgatt
cataaaagtaaagggttagagttcccagttgtatttgtagctggactcggtcgtcgtttt
aatacacaagacttaatgaaacgtttcttattgcataaagatttcggtttcggttcgcaa
tttatcgatccgcgtaaacgaattaaatatacaacattatcacagcttgcgattaagcgt
aaaatgaaaatggaattaattgcggaagaaatgcgcgtactatacgtagcattgacgcgt
gcgaaagagaagttaattttaatcggcacagttaaggatgcaaataaggaaatggaaaaa
tggcttgatgcgagggaacatagtgaatggttattaccagatcacatacgtgctggagcg
tcttgttatttagactggattgcaccttcattatatagacaccgtgatagtgaaatgctt
cttgaattaggacaaggaagtattccggatgaaatttacgggtatgacactagctggaaa
gtagaagttgtggacggtaacacgcttcttgcaccagagccagttcaagaagagaaacaa
gaattgttagaagcgcttcgtgagaaaaaggctgttcccctgcaaagtgaacggaaagaa
gaagtgtacgacagattactatggaagtacggatatgaggatgcgacatctcatcgtgcg
aagcaatctgttacagaaataaagagaaattatcaatctgaagaaggtagcgataacgcc
tttattaaaaaactacgtgtaccaattaaaacacgtccgcgctttatggagaaaaaaggg
ttaacgtacgcagagcgtggaacagcagtccatgccgttatgcagcatgtagatttgaag
aaaccgattacggccgaaacgctacaagaacaaatcgcgggaatggtaaataaggaatta
ttaacattcgagcaggcggaagaaatagcaattgaaaaagtaatttcattctttgacagt
gacttaggtaaaagggtattagcggcaaaaagtgtagagcgtgaagtaccatttacgatg
atgcttgcagcagaagaagcatatcaagattggcaagggaagagtgaagaaacgattctt
gttcaaggggttatcgactgcatgattgaagaggaagatggcattacgttaatcgacttc
aaaacagatacgattgaagggaaattcccaggcggattcgaacaagcaaaaccaatttta
gaagatcgatataaagtgcaactttcgttatatgcaaaagcactcgaaaaaagcttacaa
catcctgtgaaagagaaatgtttatacttctttgatggtaatcacgttgtaaatattgaa
gaatag
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