Bacillus thuringiensis YBT-1518: YBT1518_20940
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Entry
YBT1518_20940 CDS
T02930
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bthu
Bacillus thuringiensis YBT-1518
Pathway
bthu03030
DNA replication
bthu03430
Mismatch repair
bthu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bthu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YBT1518_20940 (polC)
03430 Mismatch repair
YBT1518_20940 (polC)
03440 Homologous recombination
YBT1518_20940 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bthu03032
]
YBT1518_20940 (polC)
03400 DNA repair and recombination proteins [BR:
bthu03400
]
YBT1518_20940 (polC)
Enzymes [BR:
bthu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YBT1518_20940 (polC)
DNA replication proteins [BR:
bthu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YBT1518_20940 (polC)
DNA repair and recombination proteins [BR:
bthu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YBT1518_20940 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
DUF1409
Motif
Other DBs
NCBI-ProteinID:
AHA73316
UniProt:
A0A9W3KEC9
LinkDB
All DBs
Position
complement(4143674..4147975)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQQERFQILLQQLQIPDDLINQYLQGGGIERLVIDKANKSWHFDLQVPRILPTEL
YELLETKLKQSFSHIARTTFALETENKQFTEEEVRAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLINVNNELESTALKKNVAKPVGDQYEAFGFPRFQLDTHIQQNAEEMQKFREQTQ
QEDRERVIQAMEEMAKKQAEESSVVHEGPITLGYLIKPDEEITPMREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLKKGMWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTPVSRLVAQAGKWG
HEAIAVTDHAVAQSFPEAYSAGKKAGVKVIYGVEANLVNDGVPIAYNEAHRLLAEETYVV
FDVETTGLSAVYDTVIELAAVKVKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGLEKTNNPVIDTLELARFLFPE
MKNHRLNTMCKKLDIELTQHHRAIYDTEATGYLLVKMLKDVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
ETLDKPVVATGNVHYLDPEDAMYRKILVSSQGGANPLNRHSLPPVHFRTTDEMLECFSFL
GEDKAKEVVVTNTQKVASLIGDVRPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKDCPTCNVAYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQFPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPETLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEDDMKGNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRARIDEIAQK
GLDAAPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATEFIIDGDSLIPPFNAVPGLGT
NAALSIVEARKNGDFLSKEDLQQRSKVSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacaaatgaacaacaagagcgatttcaaattttgctccagcagttgcaaata
ccagacgaccttataaatcaatatttacaaggcggtggtattgaaaggctcgttattgat
aaagcgaataaaagttggcattttgatttacaagtgccacgtattttgcctacagaatta
tatgaattgctagaaacaaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattagaaacagagaataaacaatttacagaagaagaagtaagggcgtattggccactt
tgtacggaacgaattacattttcacccatgttcgcgtacttaaagaagcaacttccgcag
gtgaatggagtaaagttgttaataaatgtaaataatgagctggagtctactgctttaaag
aaaaacgttgcgaaaccagtgggggatcaatacgaagcttttggattcccgcgtttccag
ttagacacacatatacagcaaaatgcagaagaaatgcaaaagtttcgtgagcaaactcag
caagaagaccgcgagcgtgttatacaagctatggaagaaatggcgaagaagcaagctgaa
gaaagcagcgttgtgcatgaagggccgattacactcgggtatcttattaagccggatgaa
gagattacaccgatgcgagaaattcaagatgaagaaagaagaaaaacggttcaaggatat
gtcttccatgtagaaacaaaagagcttcgtagtgggcgtacgttattaactttaaaaata
acggattatacggattctattatgattaaaatgttctcgcgtgacaaagaagatattcca
atgctgcaatccttgaaaaaaggaatgtgggtgaaagcgcgtggttctgttcaaaacgat
acattcgttcgagatttagtaatgattgcaaatgatattaatgaaataacagggccgtct
cgtaaagataaagcgccagaaggcgaaaagcgtgtagaacttcatcttcacactccgatg
agccaaatggatgctgttactcctgtttctaggcttgttgcccaagctggtaaatgggga
catgaagctattgcggttacagaccatgctgtggctcagtcgttcccggaggcatattct
gcggggaaaaaagctggagttaaagttatatacggtgtagaagcgaatttagttaatgat
ggtgtaccgatagcgtataacgaggcgcatcgtttacttgcggaggaaacgtatgttgtt
ttcgatgttgagacgacaggtttatcagctgtatacgacacagtcattgagttggctgcc
gtaaaagtaaagggtggcgaaatcattgatcgctttgaatctttcgcaaatccacatcaa
ccattatcagcgacgattattgaattaacaggtattacagatgatatgttaactgatgca
ccagaagtggacgaagtgtttaaaaagtttgaggaatggatgggtgaccatacacttgtt
gcccataatgcaagctttgatatgggctttattaacgtaggttttaaaaaggctgggtta
gaaaaaacgaataaccccgttattgatacgttagaacttgcacgattcttattcccagaa
atgaaaaatcatcgattaaatacgatgtgtaaaaaacttgatattgaattaacgcaacat
caccgtgcgatttatgatacagaagcgacgggatatttacttgtgaaaatgttgaaagat
gtaattgaaaagggatttgaatatcacgatcaattaaatgatagcatgggacaaggggat
gcgtataagcgtggccgtccaagtcatatgacgttacttgccacatcagatgttgggttg
aaaaatttatataaacttgtttcatattctcaccttaattacttttaccgtgtaccacga
gtaccgaggtcactattaaaaaaataccgtgaaggaattttagtaggaacggcttgtgat
aaaggtgaagtatttgaggcaatgatgcaaaaagctcctgaagaggtagaagaaattgca
cagttctatgattacattgaagtaatgcctccagaggtgttgcgtcatttagtagagcgt
gaactcgttcgagatgaaggacaattaaaaacaattatctctaacttagtaaaactaggt
gagacgttagataaaccagttgtcgctacagggaacgtgcattacttagatccagaagat
gcaatgtatcgtaaaattttagttagttcacagggcggggcaaatccgttaaatcgacat
tcattaccgccagtacatttccgtacaactgatgaaatgctagagtgtttttcattttta
ggtgaggacaaagcgaaagaagttgttgtaacgaatacacaaaaagttgcgtcattaatt
ggtgatgttcgtccggtaaaagatgatctatatacaccgaaaattgagggtgccgatgat
gaaacacgtgatatgagttataaaatggcacgcagtatatacggtgaagaactaccagaa
attgtagaggctcgcttagaaaaagaattgaaaagtattattggacatggatttgccgtt
atttatttaatctcacataagcttgtgaaaaaatcgttagtcgacggatatctagtaggt
tcgcgtggttcagtaggttcatcgttcgttgcaacgatgatggaaattacagaagtaaac
ccattaccaccacactatgtctgtccaaaatgcaagcaatctgaattctttaatgatggt
tcggtaggctctggtttcgacttaccagataaagattgtccgacatgtaatgtggcatat
gtaaaagatggacatgatatcccattcgaaacgttccttggattcaaaggagataaggta
cctgatatcgatttgaacttctccggggaataccaaccacgtgcccataactatacgaaa
gtactgttcggtgaagattatgtataccgtgctggaacgattggtacagttgcggaaaaa
acagcttatggatatgtaaaaggttatgcaaatgatcacaatttaacaattcggaatgca
gagattgaccgcttagtagcgggatgtacaggggtaaaacgtacaactggacagcatcca
ggtggtattatcgttgtgccagattacatggatatctttgatttctccccaatacagttt
cctgctgattcaattggtgctgagtggagaacaacgcattttgactttcactcgattcat
gataatttattgaaacttgatatactaggacacgatgatccgaccgttattcgtatgtta
caagatttaagtggtattgatccgaaaacaatcccaacggatgatccagaggtaatgaaa
attttctctggtccagaaacgttaggggtaacggaagaacaaattaactgtaaaacaggt
acacttggtatcccagaattcggtacgaaattcgtaagacagatgttagaagagacaaaa
ccaacgacattctcagaattggtccaaatttctgggctgtcacatggtactgacgtatgg
ctgggtaatgcaaatgagttaatttataacggtacatgtacgctgagtgaagttatcggt
tgtcgtgatgacatcatggtatatttaatctatcaaggtttagatccatcattagccttc
aaaatcatggagtcggttcgtaaaggtaaaggtgtaccggaagaatgggaagatgacatg
aaaggtaataatgtaccaggttggtatattgattcatgtaagaagattaaatatatgttc
cctaaagcccatgcggctgcttacgtacttatggctgtgcgtatcgcatactttaaagta
cattttgcacttttattctatgcggcatattttacagtccgtgcagatgattttgatgta
gaggcgatggcgaaaggttcagcatctatacgtgcaagaattgatgaaattgctcaaaag
ggactcgatgctgcgccgaaagagaagagtttattaacggtactagaaatgacacttgaa
atgtgtgagcgtggatactcattccaaaaggttgatttataccgttcgcatgcaacggaa
tttattattgatggggactcattaatccctccgtttaatgcagtgcctggtcttggtacg
aacgcagccttaagtattgtggaagcgcgcaaaaatggagacttcttatcaaaagaagac
ttacagcaacgaagtaaggtttcgaaaacaattattgagtatttagatagccaaggttgt
ttaggagatttgccggatcaaaaccaattatcactgttctaa
DBGET
integrated database retrieval system
