Bacillus thuringiensis MC28: MC28_3041
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Entry
MC28_3041 CDS
T02263
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
btm
Bacillus thuringiensis MC28
Pathway
btm03030
DNA replication
btm03430
Mismatch repair
btm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
btm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MC28_3041 (polC)
03430 Mismatch repair
MC28_3041 (polC)
03440 Homologous recombination
MC28_3041 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
btm03032
]
MC28_3041 (polC)
03400 DNA repair and recombination proteins [BR:
btm03400
]
MC28_3041 (polC)
Enzymes [BR:
btm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MC28_3041 (polC)
DNA replication proteins [BR:
btm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MC28_3041 (polC)
DNA repair and recombination proteins [BR:
btm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MC28_3041 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFU14463
LinkDB
All DBs
Position
complement(2987528..2991829)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQQERFQILLQQLQIPEDLINQYLQGGGIEKLVIDKANKGWHFDLQVPRILPTEL
YELLEVKLKQSFSHIARTTFALQAENKQFTEEEVKAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLINVNSELESTALKKNVTKPVGDQYEAFGFPRFQLDTHIKQNAEEMQKFREQTQ
QEDRERVIQAMEEMAKKQAEESSVVHEGPVVLGYLIKPDEEITPMREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLRKGMWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTPVSRLVAQAGKWG
HEAIAVTDHAVAQSFPEAYSAGKKAGVKVIYGVEANLVNDGVPIAYNEAHRLLAEETYVV
FDVETTGLSAVYDTVIELAAVKIKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGLAKTNNPVIDTLELARFLFPE
MKNHRLNTMCKKLDIELTQHHRAIYDTEATGYLLVKMLKDVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
ETLDKPVVATGNVHYLDQEDAMYRKILVSSQGGANPLNRHSLPPVHFRTTDEMLECFSFL
GEDKAKEIVVTNTQKVASLIGDVHPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKECPTCNVSYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKILFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQYPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEDMKSNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRVKIDEIAQK
GLDAAPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATEFIIDGDSLIPPFNAVPGLGT
NAALSIVEARKNGDFLSKEDLQQRSKVSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaacaaatgaacaacaagagcgatttcaaattttgctccagcagttgcaaata
ccagaagaccttataaatcaatatttacagggcggtggtattgaaaagctagttattgat
aaagcgaataaaggttggcattttgacttacaagtgccacgtattttgccgacagaatta
tatgaattgctagaagtgaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattacaagcagagaataaacaatttacagaagaagaagtgaaggcatattggccgctt
tgtacggagcgaattacattttcacctatgtttgcttacttaaagaagcaactacctcag
gtaaatggagtgaagttgttaataaatgtgaatagcgagttagaatctactgctttaaag
aaaaatgttacgaaaccagtaggtgatcaatacgaagcttttggattcccacgttttcag
ttagacacacatataaagcaaaatgcagaagaaatgcaaaagtttcgtgagcaaactcag
caagaagaccgtgagcgtgtaatacaagctatggaagaaatggcgaagaagcaagctgaa
gaaagtagcgttgtgcatgaaggaccggttgtactcggatatcttattaagccagatgaa
gagattacaccgatgcgagaaattcaagatgaagaacgaagaaaaacggttcaagggtat
gtattccatgtagaaacaaaagagcttcgtagtgggcgtacgttattaactttaaaaata
acggactatacggattctattatgattaaaatgttttcgcgtgacaaagaagatattcca
atgctgcaatccttgagaaaaggaatgtgggtgaaagcacgtggttctgttcaaaatgat
acatttgttcgagatttagtaatgattgcaaacgatattaatgaaataacaggaccatct
cgtaaagataaggcgccagaaggtgaaaaacgtgtagagcttcaccttcataccccaatg
agtcaaatggacgctgttacgcctgtctctaggcttgttgctcaagctggtaaatgggga
catgaggctattgcagttacagaccatgctgttgctcagtctttcccagaagcatactct
gcgggtaaaaaggctggggttaaagttatatacggtgtagaggcaaatttagttaatgat
ggtgtaccgatcgcatataacgaagcgcatcgtttacttgcagaggaaacgtatgttgtt
ttcgacgttgagacgacaggtttatcagctgtatacgatacagtcattgagttagctgcc
gtaaagataaaaggtggcgaaatcattgatcgttttgaatctttcgcaaatccgcatcaa
ccattatctgcgacgattattgaattaacaggtattacagatgatatgttaactgatgca
ccagaagtggacgaagtgtttaaaaagtttgaggaatggatgggtgaccatacacttgtt
gctcataacgcaagctttgatatgggctttattaacgtaggttttaaaaaggcagggcta
gcaaaaacgaataaccctgttattgatacgttagaacttgcgcggttcttattcccggaa
atgaaaaaccatcgattaaatacgatgtgtaaaaagcttgatattgaattaacgcaacat
caccgtgcgatttatgatactgaagcaacgggatacttacttgtgaaaatgctaaaagat
gtaattgaaaagggatttgaatatcatgatcaattaaatgatagtatggggcaaggggat
gcgtataaacgtgggcgtccaagtcatatgacattacttgctacatcagatgttggattg
aaaaatttatataaacttgtttcatattctcacctgaattatttttaccgtgtgccacgt
gtaccaaggtcactattaaaaaaatatcgtgaaggaattttagtaggaacggcttgtgat
aaaggtgaagtgtttgaggcaatgatgcaaaaagcacctgaagaagtagaagaaattgcg
caattctatgattacattgaagtaatgcctccagaggtgttacgtcatttagtagaacgt
gaacttgttcgagatgaaggacaattaaaaacaattatttctaacttagtaaaactgggt
gagacgttagataaaccggttgtcgctacagggaacgtgcattatttagatcaagaggat
gctatgtatcgtaaaattttagtgagttcgcagggcggagcaaatccgttaaatcgacat
tcattaccgccggtacatttccgtacaacagatgagatgttagagtgtttttcattttta
ggtgaagacaaagcgaaagaaattgtagtaacgaatacacaaaaggttgcgtcattaatt
ggtgatgttcatccagtaaaagatgatttatacacaccgaaaattgaaggtgctgatgat
gaaacgcgtgatatgagttataaaatggcgcgtagcatttatggggaagagctaccagaa
atcgtagaagcccgattggaaaaagaattaaaaagtattatcggacatggatttgctgta
atttatttaatttcacataagctggtgaaaaaatcgttagtagacggatatttagtaggt
tcgcgtggatctgtaggttcatcattcgttgcaacgatgatggaaattacagaagtaaat
ccattaccaccacattatgtatgtccgaagtgtaagcaatcagaattctttaatgacggc
tcggtaggttctggttttgatttaccagataaagaatgtccaacatgtaatgtttcatat
gtaaaagatggacatgatattccgttcgaaacgttccttggatttaaaggagataaggta
cccgatatcgatttgaacttctccggcgaataccaaccacgtgcccataactatacgaaa
atactgttcggtgaagattatgtatatcgtgcaggaacgattggtacagttgcagaaaaa
acggcttatggatatgtaaaaggttatgcaaatgatcataatttaacgatacgaaatgca
gaaattgaccgcttagtagcagggtgtaccggtgtaaaacgtacaactggacagcatcca
ggtggtattatcgttgtgccagattacatggacatctttgatttctcaccaatacagtat
ccggcagattcaataggggctgagtggagaacgacacactttgatttccactcaattcat
gataatttattgaaacttgatatactaggacacgatgatccgacagttattcgtatgtta
caagatttaagtggtattgatccgaaaacaatcccaacagatgatccggaagtaatgaag
attttctcaggtccggagtcattaggagtaacggaagaacaaattaactgtaaaacaggt
acacttggtataccggaattcggtacgaaattcgtaagacaaatgttagaagagacaaaa
ccaacgacattctcagagttagtccaaatctctggactatcacatggtacggacgtatgg
ctcggtaatgcaaacgagttaatttataacggtacatgtacgctgagtgaagttatcggt
tgtcgtgatgacatcatggtatatttaatctatcaaggtttagatccatcattagccttc
aaaattatggagtcggttcgtaaaggtaaaggtgtaccggaagaatgggaagaggacatg
aaaagtaataatgtaccaggttggtatattgattcatgtaagaagattaaatacatgttc
cctaaagcccatgcggcagcttacgtacttatggctgtacgtatcgcatattttaaagta
cattttgcacttttattctatgcggcatactttacggttcgtgcagatgactttgatgta
gaggcgatggcaaaaggttcagcatctatacgtgtaaagattgatgaaattgcgcaaaaa
ggattagatgcagcgccgaaagagaagagtttattaacggtactagaaatgacacttgaa
atgtgtgagcgtggatactcattccaaaaggttgatttatatcgctcgcatgcaacagaa
ttcattattgatggagactcattaattcctccatttaatgcggtgcctggtcttggtaca
aacgcagctttaagtatcgtagaagctcgtaaaaatggagatttcttatcaaaagaagat
ttacagcagcgcagtaaggtttctaaaacgattattgagtatttagatagtcaaggttgc
ttaggtgatctacctgatcaaaaccaattatcactgttctag
DBGET
integrated database retrieval system
