KEGG   Bacillus toyonensis: Btoyo_3019
Entry
Btoyo_3019        CDS       T02901                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bty  Bacillus toyonensis
Pathway
bty03030  DNA replication
bty03410  Base excision repair
bty03420  Nucleotide excision repair
bty03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bty00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Btoyo_3019
   03410 Base excision repair
    Btoyo_3019
   03420 Nucleotide excision repair
    Btoyo_3019
   03430 Mismatch repair
    Btoyo_3019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bty03032]
    Btoyo_3019
   03400 DNA repair and recombination proteins [BR:bty03400]
    Btoyo_3019
Enzymes [BR:bty01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Btoyo_3019
DNA replication proteins [BR:bty03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Btoyo_3019
DNA repair and recombination proteins [BR:bty03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Btoyo_3019
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Btoyo_3019
   MMR (mismatch excision repair)
    DNA ligase
     Btoyo_3019
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Btoyo_3019
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD RNA_pol_A_CTD HHH PTCB-BRCT BRCT_2 RNA_ligase HHH_3 5_3_exonuc
Other DBs
NCBI-ProteinID: AHA08933
LinkDB
Position
2936807..2938816
AA seq 669 aa
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SVRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGITGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDTKIAAKRNLSMFVYGLANVEEKTISSHSESL
DFLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPNLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVIFDKRTGEEEEYRMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFDADYIRTFADLYALTKEQLLQ
LERFGEKSATNLIQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDALVKATEE
ELKSINEIGEKMAQSVVTYFDNEDVLELLQQFKEYGVNMTYKGIKSADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcaaaagagatagcaaaaaaacgtatagaagaactacgtgatttgttaaatacattt
aactatcaatatcacgtattagacaatccttctgtttctgatgcggagtatgaccgtaat
atgcaggagcttataaaattagaagcagagaatccagagttcatgagtgaagactctccc
tccgtgcgcgttgggggaactgttcttgatatatttgaaaaagtaacgcataagtcaccg
atgttaagtttaggaaatgcatttaacgaaggagatttgcgtgattttgaccgaagagta
cgtcaaggaattgatgatgcgaatgtaagatatatatgcgaattaaaaattgacggactt
gctgtttcacttcattatgaaaaaggacgctttattcaaggtgcaacacgtggtgatggt
ataacaggtgaagatattacccaaaacttgaaaacgattaaagcaattccacttcgatta
aatgaagaggtaacgttagaagcgcgaggcgaggcttatatgccgaagcgttcattcgtt
aaactaaatgaagaaaaagagcaaaacggtgaagatgtatttgcgaatccgcgtaatgcg
gcagcaggttcaatacgtcaacttgatacgaaaattgcagcaaagcgtaacctatccatg
tttgtatatggtcttgcaaatgtagaagaaaaaacaatttcatcgcatagcgaatcactt
gatttcttaggtgaactggggtttaagacaaatccaaatcgccgtacatgtgaaacaatt
gaagaggttatagcttatgtagaagaatggcaggaaaaacgtccgaatcttgattatgag
attgatgggatcgttataaaagtagacgatgttgctcttcaagaaagcctaggaactact
gcaaagagtccaagatgggcgattgcttataaattcccggctgaagaagttgtaacgaga
ttaacgggcattgaattaagtgttggccgtacaggggttgtaacaccgactgcagagtta
gaaccagtacgagtggctggtacgatcgttcgtcgtgcttccttacataacgaggattta
attcgtgaaaaagacattcgaattggtgactacgttgttgtgaaaaaggctggagatatt
attcctgaggttgtgaacgttatttttgataagcgtactggtgaggaagaagaataccgc
atgccaacgcattgtccggcatgtgagagtgaactagttcgtttagaagaagaggttgca
cttcgttgtataaatccaacttgtcctgcccaaattcgcgagggattaattcatttcgtt
tcaagaaatgcaatgaatattgacggacttggcgagcgtgtcatcacacagctctttgat
gcagattatattcgtacgtttgcagatttatatgcattgacgaaagaacaattactacag
ctagagcgttttggtgaaaaatcagcaacaaatttaatacaagcaattgagaattcgaag
gaaaactcgttagagcgattattatttggccttggaattcgccatgtcggggcgaaagca
gcacgtacatttgcagagcattttgaaacgatggatgcacttgtgaaagcgacggaagaa
gagctaaaatcaattaatgaaattggagaaaaaatggcgcaatccgttgtgacatatttt
gataatgaagatgtattagagctattacaacagtttaaagagtatggcgtgaacatgaca
tacaaaggcataaaaagtgcagatttacaaaatgttgaatcttactttgcagggaaaact
gtcgtcttaactgggaaattagaagtgatgggacgcagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaaaagtacggatttagttgttgctggt
gaagctgctggctcaaaattagcgcaagcagagaagcacaatgttgaagtttggaatgaa
gagaggttcttacaagagctaaataagtaa

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