Burkholderia humptydooensis MSMB43: AQ610_05145
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Entry
AQ610_05145 CDS
T04266
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bud
Burkholderia humptydooensis MSMB43
Pathway
bud03030
DNA replication
bud03430
Mismatch repair
bud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQ610_05145
03430 Mismatch repair
AQ610_05145
03440 Homologous recombination
AQ610_05145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bud03032
]
AQ610_05145
03400 DNA repair and recombination proteins [BR:
bud03400
]
AQ610_05145
Enzymes [BR:
bud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQ610_05145
DNA replication proteins [BR:
bud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AQ610_05145
DNA repair and recombination proteins [BR:
bud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AQ610_05145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALX41873
UniProt:
A0A7U4SRL7
LinkDB
All DBs
Position
1:1111466..1112605
Genome browser
AA seq
379 aa
AA seq
DB search
MSASPLLHPAIDTPLAFVDLETTGGSAAEHRITEIGVVVVNASHVSTWTTLVDPRQPIPP
FIQQLTGITDAMVRGAPTFADIASALFERLDGKLFVAHNASFDRGFLRAEFERAGVAFNP
DVLCTVRLSRALFPRESRHGLDALIERHALAPSARHRALADADLIWQFWQKLHDAIPAER
LREQIARTTRRFRLAGELTEAYLESAPAGCGVYALFGDDDAPLYVGRSVRVRQRLRALLT
GERRSAKEMRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRPDRSAAGAAHWPF
DGPVAFEERGESSVFHVVDRWRYVGAASSLEQAAALAADARAAGEGMSDAAPAVRRILQT
HLARGLELIPLAGAAPAAA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgccgctgcttcatcccgcgatcgacacgccgctcgcgttcgtcgacctc
gaaaccaccggcggctcggccgccgagcatcgcatcaccgaaatcggcgtcgtcgtcgtg
aatgcgagccacgtgtcgacgtggacgacgctcgtcgatccgcggcagccgattccaccg
ttcatccagcaactcacgggcatcaccgacgcgatggtgcgcggcgcgccgacgttcgcc
gacatcgcgtccgcgttgttcgagcggctcgacggcaaactcttcgtcgcgcacaacgcg
agcttcgaccgcggcttcctgcgcgcggagttcgagcgcgcgggcgtcgcgttcaatccc
gacgtgctttgcacggtgcggctgtcgcgcgcgctttttccgcgcgagtcgcgccacggg
ctcgacgcgctgatcgagcggcacgcgctagcgccgtcggcgcgccaccgggcgcttgcc
gacgccgatctcatctggcagttctggcaaaaattgcacgacgcgatacccgccgagcgg
ctgcgcgagcagatcgcgcgcacgacgcgccggttcaggctcgccggggagttgacggaa
gcgtatctggaaagcgcgcccgccggctgcggcgtctacgcgctgttcggcgacgacgat
gcgccgctctatgtcggtcgcagcgttcgggtccgccagcggttgcgcgcgctgctgacg
ggcgagcgacgctcggcgaaggaaatgcggctcgctcaactggttcggcgcgtcgaatgg
cgcgagacgggcggcgagctcggcgcgctgctggccgaggcggactggatcgcgtcgctc
gcgccgtcgttcaaccggcggccggaccggagcgccgcgggcgcggcgcactggccgttc
gatgggccggtcgcgttcgaggagcgcggcgagtcgagcgtcttccatgtggtcgaccgt
tggcgctacgtcggcgcggcatcgtcgctcgagcaggcggcggcgctcgcggccgatgcg
cgcgcggcgggcgagggcatgtcggacgccgcgccggcggtgcgccgcattctgcagacg
catctcgcgcgcgggctcgagctgattccgctcgcgggcgccgcgcctgccgcagcctag
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