Stenotrophomonas maltophilia JV3: BurJV3_1208
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Entry
BurJV3_1208 CDS
T01596
Name
(GenBank) DNA repair protein and transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
buj
Stenotrophomonas maltophilia JV3
Pathway
buj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
buj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BurJV3_1208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
buj03000
]
BurJV3_1208
03400 DNA repair and recombination proteins [BR:
buj03400
]
BurJV3_1208
Enzymes [BR:
buj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BurJV3_1208
Transcription factors [BR:
buj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BurJV3_1208
DNA repair and recombination proteins [BR:
buj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BurJV3_1208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
CobS_N
Motif
Other DBs
NCBI-ProteinID:
AEM50540
LinkDB
All DBs
Position
complement(1359874..1361352)
Genome browser
AA seq
492 aa
AA seq
DB search
MDTALALDTAACDRARLARDARFDGVFFTAVRSTGIYCRPVCPAPPPKPRNITYYPTAAA
AAAAGYRPCLRCRPELAPQAQQALAGQTVQRALALIHGGFLQEQPVADLATKLGLSARQL
QRLFVEHLGATPGQIHATHRLLLAKQLLTETTLAVTDVALAAGYNSLRRFNTAFLQGCGM
APTALRRQHQPLAADDGGLVLRLGYRPPLDFPRMLAFLRKRSLPGIELIGEDSYQRVLGT
PERPTLLRVTADPKRPELRLQLGAVDPRLIPDIVRRVRRVFDLDADLQQVHAALGEEPLL
ARGIAERPGLRVPGGWDGFEVGVRAVLGQQVTVAAATTFARRLVDAYGAHLPGMPSDFDR
QFPAPEVLAEAPLESIGLPRSRAATVRALATACANGQLDFGPGQALEEFVARCVALPGIG
PWTAQYIALRGLGQPDAFPAGDLVLQQVLGHAQGQRLSERATEARSQPWRPWRAYAVLHL
WHLSGTFVGEPT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccctcgccctcgacaccgccgcctgcgaccgcgcccgcctggcccgcgac
gcccgcttcgacggcgtgttcttcaccgccgtgcgcagcaccggcatctattgccgcccg
gtctgtcccgcaccgcccccgaagccgcgcaacatcacctactaccccaccgccgccgcg
gccgccgctgccggctatcgcccgtgcctgcgctgccgcccggagctggcaccacaggcc
cagcaggcactggccgggcagaccgtgcagcgcgccctcgccctgatccatggcggcttc
ctgcaggagcagccggtggccgatcttgcaacgaagctcggcctcagcgcgcgccagctg
cagcgcctgttcgtcgaacacctgggcgcgacgcccgggcagatccatgccacccatcgc
ctgctgctggccaagcagctgctgaccgaaaccacgctggcggtgaccgacgtcgcgctg
gccgccggctacaacagcctgcgccgtttcaataccgcgttcctgcagggttgcggcatg
gcgcccaccgcactgcgccgccagcatcaaccgctggccgccgacgatggcggcctggtg
ctgcgcctgggctaccgtccaccgctggacttcccgcgcatgctggcgttcctgcgcaag
cgcagcctgcccggcatcgaactgatcggcgaggacagctaccagcgcgtgctgggcacg
ccggagcggcccaccctgctgcgcgtcactgcagacccgaagcgcccggagctgcgcctg
cagctgggtgcggtggatccccgcctgatcccggacatcgtgcgccgcgtgcgccgcgtg
ttcgatctggatgccgacctgcagcaggtgcatgccgcgctcggcgaggaacctctgctg
gcgcgcgggatcgccgagcgccccggcctgcgcgtgcccggtggctgggatggcttcgag
gtcggcgtgcgcgccgtgcttggccagcaggtcacggttgccgcagccaccacctttgcg
cggcggctggtcgatgcctatggcgcgcacctgccgggcatgccgtccgacttcgatcgc
cagttcccggcacccgaggtcttggccgaggcgcctctggaatcgatcggcctgccgcgc
agccgcgccgccaccgtgcgcgcattggccaccgcctgcgccaatggccagctcgatttc
gggcccggccaggcgctggaagagtttgttgcccgctgcgtggcactgcccggcatcggc
ccatggaccgcgcagtacatcgccctgcgtggcctcggccagcccgatgccttcccggcc
ggcgatcttgtactgcagcaggtcctcggccacgcgcagggccagcgcctgagcgagcgc
gcgaccgaagcgcgctcgcagccgtggcgcccgtggcgcgcttacgccgtgctgcacctg
tggcacctgtccggcactttcgttggagaaccgacatga
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