Caballeronia insecticola: BRPE64_ACDS04380
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Entry
BRPE64_ACDS04380 CDS
T02684
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
buo
Caballeronia insecticola
Pathway
buo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRPE64_ACDS04380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buo03019
]
BRPE64_ACDS04380
Enzymes [BR:
buo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BRPE64_ACDS04380
Messenger RNA biogenesis [BR:
buo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRPE64_ACDS04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAN22192
UniProt:
R4WW93
LinkDB
All DBs
Position
1:complement(448806..450332)
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AA seq
508 aa
AA seq
DB search
MSFDSLGLSEPLLRAVNELGYSSPTPIQLQAIPAVLKGGDLLAGAQTGTGKTAGFTLPIL
QRLSQLAPAAGSAKRPVRALILTPTRELAAQVEESVRAYGKYLKLRSTVMFGGVGINPQI
EALRRGVDIVVATPGRLLDHMQQKTIDVSKLEILVLDEADRMLDMGFIHDIKRVLARLPE
KRQNLLFSATFSDEIKALADGLLDSPALIEVARRNTTAETVEQKIHPVDRDRKREMLTHL
IRSNNWFQVLVFTRTKHGANRLAEQLGKDGISALAIHGNKSQSARTRALAEFKDQTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAVSLVCVDEHQLLKD
IERLIKRPIPQEVIPGFEPDPSAKPEPIQRRSQGRSQGRGQGQGQGQGQGRQGQGQRSGE
ARREGGRPSGEARGAARPPKASSGAQPARDGRSQPKPAAKPVAGAGQAPRRAEPAKAPQA
DNRRKPAANPGALLSGRRDAPRSSNRGH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcactcggcctgtccgaacccttgctccgcgccgtcaacgaactcggc
tactccagccctaccccgattcagctccaggcgattcccgccgttctgaagggcggcgac
ctgctcgcgggcgcgcaaaccggcacgggcaagaccgccggcttcacgctgccgatcctg
cagcgtctgtcgcagctcgcgccggccgcgggcagcgcgaagcgccccgtgcgcgcactg
attctcacgccgacgcgcgaactcgccgcgcaggtcgaggaaagcgtgcgcgcctacggc
aagtatctgaagctgcgctcgaccgtgatgttcggcggcgtcggcatcaatccgcagatc
gaggcgctgcgccgcggcgtcgatatcgtcgtggcaacgcccggacgcctgctcgatcac
atgcagcaaaagacgatcgacgtgtcgaagctcgaaatcctcgtgctcgacgaagccgac
cgcatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcacgcctgccggag
aagcgccagaacctgctgttctcggccaccttctccgacgaaatcaaggcgctcgccgac
ggcctgctcgattcgcccgcgctcatcgaagtcgcgcgccgcaatacgacggccgagacg
gtcgagcagaagattcatccggtcgatcgcgatcgtaagcgtgaaatgctcacgcatctg
atccgcagcaacaactggttccaggtactcgtgttcacgcgtaccaagcacggtgcgaac
cgtctcgccgaacaactcggcaaggacggcatcagcgcgctcgcgattcacggcaacaag
agccagtcggcccgtacacgcgcgctcgccgaattcaaggatcagacgctgcaggtgctg
gtcgcgaccgatatcgcggcgcgcggcatcgacatcgatcaactgccgcacgtcgtcaac
ttcgacctgccgaacgtgccggaagactacgtgcaccgcatcggccggacggggcgcgcg
ggcgcggaaggcgaagcggtgtcgctggtctgcgtggacgagcatcagttgctgaaggac
atcgaacggctcatcaagcgtccgattccgcaagaagtgattccgggcttcgagcccgat
ccgagcgcgaagcccgaaccgatccagcgccgcagccaggggcgcagccaggggcgcggt
cagggtcaaggtcaggggcaaggccaagggcgtcagggacaggggcagcgcagcggcgaa
gcccgtcgcgaaggcggtcgtccgagcggtgaggcgcgaggcgcggcgcggccgccgaag
gcaagcagcggcgctcagcccgcgcgcgacggacgcagccagcccaagccggcggccaag
cccgttgcgggcgcgggacaggccccgcgccgcgccgagccggcaaaggcacctcaagcc
gacaaccgacgcaaaccggcggccaatcccggcgcgctgctcagcggccgccgcgacgcg
ccgcgttccagcaaccgcggccactaa
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