Caballeronia insecticola: BRPE64_BCDS01870
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Entry
BRPE64_BCDS01870 CDS
T02684
Name
(GenBank) pectate lyase family protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
buo
Caballeronia insecticola
Pathway
buo00040
Pentose and glucuronate interconversions
buo01100
Metabolic pathways
buo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
buo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BRPE64_BCDS01870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BRPE64_BCDS01870
Enzymes [BR:
buo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BRPE64_BCDS01870
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BAN24848
UniProt:
R4WJZ5
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Position
2:191446..192630
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AA seq
394 aa
AA seq
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MMRRLTFAFIVMIATMCADAQAAQNTCEIADAACPMVASLLAQREGYGRDATGGVSARVT
IVSSAADSGPGSLRDALARARGPTWIRFASDMTIPLESQLRVPSNVTIDGRGHRVTLLDY
GFGIYGRSNVILTHLTIDGRLRTFTQAVDIANGSRNVWIDHLDLSRFAARLVNVKNGSTD
VTVSWVKFHDDDKVMLVNNITSKNLFEHFDRDSIARVTIHHSYFVDTMQRNPRAQFGTVH
LYNNLLENWDFYGMSFSLEAKALVEGNIFINAARRACKEPPYFPTVEGVNANYCSYIPVA
PGRSALANGESDRKSYEQTKALYGYTRGYKAFISARDNLYLRDAKAVLESDQPEKVPEPS
YCYTYDHASPELAELIRTQAGNTDNDVWQSRCRR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacgcttgacgtttgcgttcatcgtcatgatcgcgacgatgtgcgccgatgca
caagcggcgcagaacacctgcgaaatcgcggacgccgcgtgcccgatggtcgcaagcctg
ctcgcgcaaagagaagggtacggccgcgatgcaacaggtggcgtgtccgcccgcgtgacg
atcgtttcgtccgccgcggactccggtccgggatcgcttcgtgacgcgctcgcgcgggcg
cgaggaccgacatggattcgctttgcgtcggacatgacgattccactcgaatcgcagctt
cgcgtgccgtcgaacgtcacgatagacggccgtgggcatcgggtaaccctgctcgattat
ggcttcggcatttacggacgctcgaatgtcatcctgacgcatctcacgatcgacgggcgt
ctgcgcacgttcacgcaggcggtcgatattgccaacggctcgcgaaacgtgtggatcgat
catctcgatctttcgcgttttgcggcgcgactcgtcaacgtgaagaacggttcgaccgat
gtcaccgtctcatgggtcaagttccacgacgatgacaaggtcatgctcgtcaacaacatc
acgtcgaagaatctgttcgagcacttcgatcgcgattcgattgcgcgtgtgaccattcat
cacagctatttcgtcgacacgatgcagcgcaatccgcgcgcgcaattcggcacggtgcac
ctctataacaacttgcttgagaactgggacttctatggcatgagtttcagtctggaggcg
aaggcgcttgtcgaaggaaacatcttcattaacgctgcgcgacgcgcttgcaaggagccg
ccatatttcccgaccgtcgagggcgtgaacgcgaactattgcagctacattccggtggcg
ccggggcgcagcgcgctcgcgaacggcgagtcggaccgcaagagctacgagcaaacgaag
gctttgtatggctatacgcggggttataaggcgttcatctccgcgcgggacaatctttat
ttgcgtgacgcgaaagccgttttagaaagcgatcagccggagaaggtgccggagccgtct
tattgctatacgtatgaccacgcttcgcccgaactcgctgaactgattcggacgcaggcg
gggaatacggataacgacgtttggcaatcgcgttgtcggcggtga
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