KEGG   Beta vulgaris (sugar beet): 104890064Help
Entry
104890064         CDS       T03548                                 

Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
bvg  Beta vulgaris (sugar beet)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bvg00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    104890064
Enzymes [BR:bvg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     104890064
DNA repair and recombination proteins [BR:bvg03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     104890064
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
4
AA seq 1190 aa AA seqDB search
MGDKIKFSVLVSFFNWTSKSKSSVQKRIKFRKFLDTYCKPIDYFSSIRLILPSLDRERGS
YGLKESVLALSLLDALAISRDSEDAKKLINWRKGGTKIAGNFAGNFSSIAAEVLQRRQSS
VSGGITIREVNGLLDRLANAENRNAKTEILGEMIRKTNSQEMKWIIMIILKDLKLGISEK
SIFQEFHPDAEDLFNVTCDLRLVCEKLSDRNVRHKRQDIEVGKAVRPQLAFRVSDCRVAW
KRLHGKEVVVECKFDGDRIQIHKNGSQVNYFSRNFIDHSEYEHGMSNVIVENVLVDGCIL
DGEMLVWDKATNRFADFGSNQEIAKAAKEGLDSDRQLCYVAFDVLYVGDTSVIHQTLKER
HELLRKVVRPVKGRLEILLPNGSSNVNLNAHRGVGEPCWSIIANHVEDAERFFKETVENR
DEGVVLKDLGSKWEPGDRSGKWLKVKPDYNKAGADLDVLIIGGYYGSGRRGGEVGQFLLG
LAEKTAPGSYPRRFVSFVRVGTGLSDEELDELVTKLKPYFRKYEYPKKAAPSFYQVTNHS
KERPDVWVESPEKSVIVSITSDIRTISSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSF
LDLVHSSNGTTQRGGGADNEGLPSDKSKRARAAKTGGNRKLNLAVPSHFTQTDVSSVKGE
SQIFSNMVFHFVNVPSDHSLNSMHKLVVENGGTFSMNLNDTVTHCVGAESRGIKYEAVKR
RGCDVIHYSWVLDCCSQKQLLPLRPKHFVFLSESSRKKLQEEIDEFSDSYFWDLNVAELK
QIFCNVNKSEDAKTVDYYKRKYCPREEWGRFHGCRVYFHLLAKSHSVDWDSFLKIATRRM
KVEVSSGGGKVTDNPSQATHIVVMQVPGHKLIFDTLFQSFPGDQKRILHSKRLHVVGSQW
LEDCLKEEQKLSEVAYNLKPATLEELPSEEENGEDDKDHKKCPASSFREEKPTTLAPKIV
PLIREGKGKRGRPLGTSTRKGKTIVSKPPRTKRARVGSRPAKLQEIASDDDSSEQEETYA
PVKASPELKMHDRVFQDIAIDAIDDKTSEHETSTLGKSGLESENIGSSSRYELSKKNEEK
KEEERKPELDEIGRRCLDNPGIVACSKPEKDTTDSTSGKLEVMLDPVQAMLLDMLPSLRR
KSQATNAVIEDRNLQSTQSQEGSSVEPTQVEPVKKKKVSYRELVKQLLKD
NT seq 3573 nt NT seq  +upstreamnt  +downstreamnt
atgggcgacaagatcaagttcagcgtactagtaagtttcttcaactggacatcaaaatca
aagtcatccgttcaaaaacgcataaaattccgcaaattcctcgacacttactgcaaacca
atcgactatttctcatcaattcgcctcattttaccttcattagatcgcgaacgaggttct
tatggcctcaaagaatcagtcctcgctctctctctcctcgacgctctcgcaatttctcgc
gattccgaagacgccaaaaaactcatcaattggcgtaaaggcggcaccaaaatcgccgga
aatttcgccggaaacttctcttcaatcgccgccgaagttctccaacgccgacaatcttcc
gtctccggcggaattacgattcgcgaagtaaacggacttctcgatcgtctcgcgaacgcc
gagaatcggaatgcgaaaactgaaattctaggcgaaatgatacgaaagacgaattcgcaa
gagatgaagtggattatcatgataatattgaaggatttgaagttagggattagtgagaag
agtatttttcaggaatttcatcctgatgctgaggatttgttcaatgtaacatgtgattta
cggcttgtttgtgagaaattgagtgatcggaatgttaggcataagagacaagacattgag
gttggaaaagctgtgagacctcagcttgcgtttagggtttcagattgtagagttgcttgg
aagaggcttcatggaaaggaggttgtagttgagtgtaaattcgatggtgatcgaattcaa
attcataagaatggctctcaggtaaactatttttctcgaaattttattgatcatagtgaa
tatgaacatggtatgtcaaatgttattgtagagaatgtgttagttgatggttgtattctt
gatggagaaatgttggtttgggataaagctactaatcgttttgctgatttcgggtcgaat
caagagattgctaaggctgctaaggaaggtttagatagtgacagacaattgtgttatgtt
gcttttgatgtgctttatgttggtgatactagtgtgattcatcagacattgaaggagaga
catgaacttcttaggaaggttgtgagacctgtaaagggtcgtttggagattttgttgccg
aatggtagtagtaatgttaatctcaatgctcatcgaggtgtaggggagccgtgttggtcg
attatagctaaccatgtggaagatgccgagaggttttttaaggagacagttgagaatagg
gatgagggagttgtgttgaaagaccttggttcgaaatgggaaccgggagataggagtggg
aagtggcttaaggtgaagcctgattacaacaaggcaggtgctgatttggatgttctgatc
ataggagggtattatggttctggtcgtcgaggaggggaggtgggtcagtttttgttgggc
ctcgcggagaagactgctcctggtagctacccaaggaggttcgtttcttttgttagagtg
ggtacaggactttctgatgaggagcttgatgaactggtgaccaaattgaagccgtatttt
aggaaatacgaatatccaaagaaggcagcaccaagtttttaccaagttactaaccactct
aaggaaaggccagatgtttgggttgagagccctgagaagtctgtgattgtctcaattact
agtgatattcgtactataagttccgaggtgtttgctgcaccttacagcttaaggtttcct
cggattgaccgggtgagatatgacaagccttggcatgagtgtcttgatgttcagtctttc
ctggatcttgtacattcgagtaatggaacaacacaaagaggaggaggtgcagataatgaa
gggttgccatctgataagtccaagcgtgcaagagctgcgaaaactggagggaataggaaa
cttaatcttgcagttccttcccatttcactcagactgatgtttctagtgtaaagggggaa
tcacaaatattttcaaatatggtttttcactttgtcaatgtgccttctgatcattctctg
aattccatgcacaagttagttgttgagaatggtggaactttctccatgaatctgaacgac
acagttactcactgtgttggggcagagagtcgagggatcaagtatgaagcagtaaagagg
cgtggatgtgatgttatccactactcgtgggttcttgattgttgctcacagaagcagctt
cttcccttgaggcccaagcattttgtcttcctttcagaatcttcaagaaaaaagttacag
gaggaaattgatgaattctccgactcctacttctgggaccttaatgttgctgagctgaag
cagatcttttgcaatgtgaataagtcagaagatgcaaaaactgttgactactacaagagg
aagtactgtccacgcgaagaatggggtcgtttccatggctgccgcgtatatttccatcta
ttggcaaagtcccattctgttgactgggacagcttcttgaaaatagccacgaggaggatg
aaagtggaagtttcttcaggtggtgggaaagttaccgacaacccttctcaagcaacccat
atagttgtcatgcaagttccggggcataagctgattttcgataccttgtttcagagtttc
ccaggggaccagaaacgcatcttacatagtaaaagacttcatgttgttggatcccaatgg
ttggaggattgcctgaaggaggagcagaaattgtccgaagtggcatacaatctgaagcca
gctaccttagaagaattgccttctgaagaagagaatggtgaagatgataaggatcataaa
aaatgcccagcctcctcgtttcgtgaagaaaagccaacgacacttgctccaaagatcgtt
ccccttattagggaaggcaaaggaaagcgaggaaggcctcttggaactagcactaggaaa
ggcaaaaccattgtcagcaaacctccaagaacaaaaagggccagagtcggaagtaggccg
gctaaattacaagaaattgcctctgatgatgattctagcgagcaagaagaaacttatgca
ccagtgaaagcaagccctgaacttaaaatgcatgaccgtgttttccaggacattgctatt
gatgctattgacgataagactagcgagcatgagaccagtacactgggaaaatctggttta
gaatctgagaatattggttcaagttcaagatatgaattatcgaaaaagaacgaagagaaa
aaggaagaagaacgcaagcctgaactcgatgagataggacgtcgctgcttagacaatcct
ggcattgttgcttgcagtaaacctgagaaagacacgacggactccacatcagggaaattg
gaggtcatgcttgatccagttcaagcaatgttgctagacatgctcccaagtcttaggagg
aaatctcaagctacaaatgctgttattgaagacagaaatttacaatcaacacaatcacaa
gagggatcgtccgtagaaccaacccaagtagaaccggtgaagaagaagaaagttagctat
agggaacttgtaaagcagttactcaaggattga

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