Blastochloris viridis: BVIR_20
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Entry
BVIR_20 CDS
T04109
Name
(GenBank) 2'-5'-RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvr03016
]
BVIR_20
Enzymes [BR:
bvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BVIR_20
Transfer RNA biogenesis [BR:
bvr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BVIR_20
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
BPS
Motif
Other DBs
NCBI-ProteinID:
ALK07838
UniProt:
A0A0H5BF03
LinkDB
All DBs
Position
17043..17576
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AA seq
177 aa
AA seq
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MPRLFTGLEIPAEIGSSLMLLRGGVPGARWVEPGDFHITLRFIGDVDDRVGREVAAMLGD
IRRKAFELSLVGLDVFGGRKPRAIYVPVEAPSVLAELQAEHERLMQRIGLSPEGRNYRPH
VTLARLRETAPRTVADYLAARGLYRSPPFRASRFVLFSSRASVGGGPYVVEAAYPLL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctcttcaccgggctggaaatcccggccgagatcggcagctcgctcatgttg
ctgcgcggcggggtgccgggggcgcgctgggtcgagcccggcgacttccacatcaccctg
cgcttcatcggcgatgtcgacgatcgcgtcggccgcgaggtcgccgccatgctcggcgac
atccggcgcaaggcgttcgagctgtcgttggtcgggctcgacgtgttcgggggtcggaaa
ccccgggcgatctatgtcccggtggaggcgccgtcggtgctggccgaactgcaggccgag
cacgagcggctgatgcagcggatcggcctttcacccgaaggtcgcaactaccggccccac
gtcaccctggcccggctgcgcgaaacggcgccgcggacggtggcggactatctggcggcg
cgcggcctctatcgcagcccgccgttccgcgcctcgcgcttcgtgctgttctcgtcgcgg
gcttcggtcggcggtggtccgtacgtcgtcgaggcggcctatcccttgctctga
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