KEGG   Blastochloris viridis: BVIR_20
Entry
BVIR_20           CDS       T04109                                 
Name
(GenBank) 2'-5'-RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
bvr  Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:bvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bvr03016]
    BVIR_20
Enzymes [BR:bvr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BVIR_20
Transfer RNA biogenesis [BR:bvr03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BVIR_20
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 BPS
Other DBs
NCBI-ProteinID: ALK07838
UniProt: A0A0H5BF03
LinkDB
Position
17043..17576
AA seq 177 aa
MPRLFTGLEIPAEIGSSLMLLRGGVPGARWVEPGDFHITLRFIGDVDDRVGREVAAMLGD
IRRKAFELSLVGLDVFGGRKPRAIYVPVEAPSVLAELQAEHERLMQRIGLSPEGRNYRPH
VTLARLRETAPRTVADYLAARGLYRSPPFRASRFVLFSSRASVGGGPYVVEAAYPLL
NT seq 534 nt   +upstreamnt  +downstreamnt
atgccgcgtctcttcaccgggctggaaatcccggccgagatcggcagctcgctcatgttg
ctgcgcggcggggtgccgggggcgcgctgggtcgagcccggcgacttccacatcaccctg
cgcttcatcggcgatgtcgacgatcgcgtcggccgcgaggtcgccgccatgctcggcgac
atccggcgcaaggcgttcgagctgtcgttggtcgggctcgacgtgttcgggggtcggaaa
ccccgggcgatctatgtcccggtggaggcgccgtcggtgctggccgaactgcaggccgag
cacgagcggctgatgcagcggatcggcctttcacccgaaggtcgcaactaccggccccac
gtcaccctggcccggctgcgcgaaacggcgccgcggacggtggcggactatctggcggcg
cgcggcctctatcgcagcccgccgttccgcgcctcgcgcttcgtgctgttctcgtcgcgg
gcttcggtcggcggtggtccgtacgtcgtcgaggcggcctatcccttgctctga

DBGET integrated database retrieval system