Paraburkholderia xenovorans LB400: Bxe_A1336
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Entry
Bxe_A1336 CDS
T00340
Name
(GenBank) Putative Transcriptional regulator, Fis family
Organism
bxe
Paraburkholderia xenovorans LB400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_23
HTH_28
HTH_7
HTH_29
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_38
HTH_5
CENP-B_N
HTH_24
GerE
HTH_3
HTH_32
MarR_2
HTH_31
Sigma70_r4
HTH_Tnp_1
Trp_repressor
HTH_IclR
HTH_20
Sigma70_r3
DNA_pol3_delta_C
TnsD
HTH_AsnC-type
Xre-like-HTH
HTH_17
HTH_11
HTH_37
HTH_Crp_2
NAD_synthase
WYL_3
Crp
Motif
Other DBs
NCBI-ProteinID:
ABE31617
UniProt:
Q13WC2
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All DBs
Position
1:complement(3443510..3447364)
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AA seq
1284 aa
AA seq
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MTISPASGSTSPVRDDFDQTSKDTDKPRPVDNALQDPAIASPVAPQATPRKNDASGRRVT
RPTLAALSSRHTSGEALPAHIARSGQATPRAGAADVLSNESVSARAERARVRATASKGLD
GSSRMLSAGAANVQRTTQPTGVLPGASTEEFKELNRQYDTVDGYAHRSSEANSRIAQQIE
AGVQQEMTGYPPQVIQFQEKQTRLQGMLAELPDSERQFYGGVLATLGAAYQLETGNDKRY
AIDEKLAGLESAVREEANRVRNDPVERVLGQFNPPVGEAYLNKEDRERVGSLEKLREEFL
QAEDAGEREDLFAEASDLKSRLQGRISVEVGKRQRVEQAHWKEANGEVDRILHEAQLQTD
PAKRYELIGRQLFQINPGQDELKDRVVLAFTQRMHDSPQLRDKLDTWHDQVSGPLNAHSV
GAAKKYTDILGNLPPVSADYVRDLSDRYNAVLQDVTYKDYSITPAARAERTAGQVLEGVE
RVLLGLTPLAPLADLQPSTLPENVRMGLDYGSALLGMLGGEGWGIAREIGLAGKAVSAAA
RDAEAANLAGEGGATAGKGLVQAAGKGLIEGLQAERTLSRDAQAAEQALREQTVAEAGPA
VDPTSLVAHQSVGDSPYGSMASYADPGVSLKDLRPGPTRGILVDAKGDRYIELGGKAYHA
RFDRDTDSWRVFNKGADLKPQYPVRLNEASQKWELDSEVGLRGGAPRIRDEVRQEVVRLL
REGELSRREIARRLGISETKVATVASQENLAGLRPGRPGVTDEMRRDTLKLLTDGQLSRA
EIARQLGISRATVGRIAQAGGISLPADAPSPLALKPEIRLKVIHLLEKGDLSQRQIARQM
GMSYSTVNSIAAKQKIPPTAATSLRNMKVSLTDRGKVVERLEEGRPPREIAAETGMSLSY
VQRIARRTGMVRSIPKGGTPEQIDQIFALRDQGKSASHIANAVKVSRTRVEDILANYNAN
TYKRLWWNTTAEKRVAVIEQLDGGKTSREVARDLDLPLETVRGVANEHRVARDSLASELL
AQGKSPEEVAESLDMHPDYVRRLTQGIPESTHDLSFTSKDWNAAMDMFKKGYDKEEVATK
LGISPWKARSLAKEFQTQTMNSVAPQQLDDIARALSNADYSLTTGDLARATDLPESTIAL
VEQQYAGGFISPSWSPQPGTSSAISPGRIDHYEWIPPLGRQQEIEAVRAMNEGHNLKDAA
AQLNQPYAAIERLYERDLPLVAPQDEVIDAPFAGLPQRGTTAFSDADQAEIRKLAQTSGL
SASFIAGLIDAPVEEVQKVLNSNP
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgacgatatccccagcgagcggttcgaccagtccggtccgggacgattttgatcaaacc
agcaaagacaccgataaacccaggccagtagacaatgcgttgcaggatcccgctatcgcg
tcgccggtagcgccacaggcaacgccgcgaaagaacgatgcatccgggcgtcgggtaaca
cgtcccacattggccgctctaagctcgcgccatacatccggcgaggcgctgccggcgcat
atcgcacgatcggggcaggcgactccgagagccggtgccgcggatgttttatcgaatgaa
tccgtttcggcgagggccgaacgcgcgcgtgtccgtgccacggcaagcaagggactcgac
ggctcgagcaggatgctttccgccggggccgccaatgtacagcggaccacgcaacccacg
ggcgtgctgcccggcgccagcacggaagaattcaaggagctcaaccggcagtacgacacg
gtggatggctacgctcaccgcagcagcgaggccaactcccggattgcgcagcaaatcgaa
gcgggcgtccagcaggaaatgaccggatacccgcctcaggtcatccagttccaggaaaaa
caaacgcgtctgcaagggatgctcgccgagttgccggatagcgaacgtcagttctacggc
ggggttcttgcgacgttgggcgcggcctaccagcttgaaaccggcaacgacaaacgctac
gcgatcgacgagaagttggccgggctggagagcgccgttcgtgaagaggccaaccgcgtt
cgcaacgatcctgtcgagcgggtgctggggcagttcaacccgcccgtgggcgaagcttat
ctgaataaggaggaccgggagcgtgtcggcagcctggagaaattacgcgaagaatttctc
caggcagaggacgccggcgaacgggaggacctgttcgccgaagccagcgacctcaaaagc
agactgcaggggcgaatctcagtggaagtcggcaaacgccagcgcgtggaacaggcgcat
tggaaagaggccaacggcgaagtggaccgcatcctgcacgaagcacaactgcagacagat
cccgcaaagcgctacgaactgattggccgtcaactttttcagatcaaccccggccaggac
gagttgaaagatagagtcgttctggcttttacgcagcgcatgcacgactcgccgcaattg
cgggacaagctggatacctggcatgatcaggtcagcggcccactcaatgcgcattcagtg
ggcgcggccaaaaaatatacggacattctcggcaacctgccgccggtgagcgccgactac
gtgcgcgatctcagcgaccggtacaacgccgtcctccaggacgtcacttacaaagactat
tcaatcacccctgcggcgcgcgcggaaaggacggccgggcaagtactggaaggcgtcgag
cgtgtgcttctcggtctgacgcctttagccccgctggcggatctgcaaccctccaccttg
ccggagaacgtccgcatggggctcgattatggttcggccctcctcggcatgctgggtggg
gaaggctggggtattgccagagaaatcggtcttgcaggcaaagcggtctctgcggcagca
cgggatgccgaggcggccaacctggctggagagggcggcgccactgccggcaaaggtctg
gttcaggcagcgggtaaaggcctgatcgaggggctgcaggcagaacggaccttgagccgc
gacgcgcaggcagcggaacaggcgctgcgcgagcagaccgttgccgaggccggccccgcg
gtggatccgaccagtctggttgcgcaccagagcgttggggacagcccctatgggtcgatg
gcgagctatgccgaccctggcgtttcgctgaaagatctccgcccggggccgacccgaggc
atcctggtggatgccaaaggtgaccggtatatcgaacttggcggaaaggcttatcacgcc
cgttttgaccgggacacagacagttggcgggtgtttaacaaaggggctgatttgaaaccg
caataccccgtccgcctgaatgaggcatcgcagaagtgggagcttgatagcgaggtgggg
ctaaggggcggcgcgccaagaattcgcgacgaagtccggcaggaagtcgtcagactgttg
agggaaggggaattgtcgcgccgcgagatagcaaggaggctgggaatatctgaaacgaag
gtagcaacagttgcgagtcaagagaacctcgccgggctgcggcccggtagaccaggagtc
acggatgaaatgcgacgggataccctcaagctgctgacagacggacagttgtcacgggct
gagatagccagacaattgggaatctcgagagcgaccgtaggcaggattgcccaggctggc
ggcatcagcttacctgccgatgcgccttctcccctggcactcaagccggaaattcgactc
aaagtcattcatctgttagagaaaggcgacttgtcacaacgacaaatagcgcgtcagatg
ggaatgtcgtattccacagtcaacagcattgcggcgaaacagaagattccgcctaccgcc
gctacctctctgcgcaatatgaaagtctcactgacagaccgcgggaaggtcgtagagagg
cttgaggaaggaaggcccccccgggaaatagccgcggaaaccggaatgtctctctcgtat
gtgcaacggattgccaggcgcacaggcatggttcgttcgatcccgaagggcggtacgcca
gagcagatagatcagatattcgcactgagagaccaggggaaatccgcctcccatattgcc
aatgcggtcaaggtttcgaggaccagggtcgaagacattcttgcgaattacaacgccaat
acttacaaaaggttgtggtggaatacgacagcggaaaagcgggtggctgtcattgagcaa
ctggacggaggcaaaacctccagggaagttgccagggatctggatcttccacttgaaaca
gtacgtggggttgccaatgagcaccgggtggcaagggattcgttggcgagcgagcttctc
gcacaaggaaaatcgccggaagaggttgcagagtccctggacatgcatccggattatgtc
aggcgtctgacccaaggcatacccgagagcacacacgacctttctttcacctcgaaagac
tggaatgcggcgatggacatgttcaaaaaaggctatgacaaagaggaggttgccacgaaa
cttggtatctctccgtggaaggcccgtagccttgccaaggaattccagacgcaaaccatg
aattccgtggcgccgcagcaacttgacgatattgcacgggcactcagcaacgcggattac
agcttgacgactggcgacctcgcccgggcgactgacttgcccgaaagtacgatagcgctc
gtcgagcagcaatatgcgggcggttttatatcgccctcatggtctccgcaaccgggtacg
tcctctgccatatcgccgggccgtatcgaccattacgagtggattcctccgcttgggcga
cagcaggaaattgaggcggttcgtgcaatgaacgaaggccataatctcaaggacgctgct
gcgcaactcaaccagccttacgcagccatcgagcgtttgtacgagagagacctgcccctc
gtggcgccgcaggacgaagtgatcgacgccccctttgcgggactgcctcagcggggaacg
actgcgttcagcgacgcggatcaggctgaaattcgaaagctggcgcagacgagcggcttg
agcgcgtcattcattgccggattgattgacgcgccagtggaggaggttcaaaaagtactg
aattcgaatccctga
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