KEGG   Bacillus amyloliquefaciens XH7: BAXH7_00115
Entry
BAXH7_00115       CDS       T01836                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bxh  Bacillus amyloliquefaciens XH7
Pathway
bxh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bxh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BAXH7_00115 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bxh03021]
    BAXH7_00115 (rpoC)
   03400 DNA repair and recombination proteins [BR:bxh03400]
    BAXH7_00115 (rpoC)
Enzymes [BR:bxh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BAXH7_00115 (rpoC)
Transcription machinery [BR:bxh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BAXH7_00115 (rpoC)
DNA repair and recombination proteins [BR:bxh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BAXH7_00115 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 Apocytochr_F_C Peptidase_M23 RPOC_hybrid
Other DBs
NCBI-ProteinID: AEK87267
LinkDB
Position
115868..119467
AA seq 1199 aa
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAINKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTDEQRSKLLITTVGKLVFNEILPESFPYMNEPSKSNIEEKTPDRFFLDKGA
DVKAVIAEQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFRYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVMKQFRRGLITEEERYERVISIWSSAKDVIQGKLMKSL
DEVNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTEIIERLE
ERLIGRFARKQIKHPETGAVLINENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATISEIDGTIAEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDQITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGHPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMNYRKVKPVSNVQPAEDMVPAE
NT seq 3600 nt   +upstreamnt  +downstreamnt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccggataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttgaaa
cctgaaaaggacggcctgttctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcggcaagtacaagcgggttcgttataaaggcgtagtttgtgaccgttgcggagtt
gaagtaacgcgggctaaagtccgtcgtgagagaatggggcatattgaactggctgccccg
gtttctcacatttggtatttcaaaggtattccgagccgtatgggtcttgtattggatatg
tcaccgcgtgcgctggaagaagtcatttactttgcttcttacgtcgtaactgacccggcc
aatacaccgctcgaaaagaaacagcttttatctgaaaaggaataccgtgcgtatctggat
aagtacggaaacaaattccaagcctctatgggtgcggaagccattaataaacttctgcag
gacatcgacctcgtcaaagaagttgatatgttaaaagaagagctgaaaacctctcaagga
cagcgccgtacgcgtgcgatcaaacgccttgaagtgcttgaagccttccgtaattcagga
aacaagccgtcttggatgatcctcgatgtgcttccggttattccgcctgagttaagaccg
atggttcagcttgacggcggacgtttcgcaacgtctgacctgaacgacctttaccgtcgt
gtcatcaaccgtaacaaccgtttaaaacgtctgttagacctcggtgctcctagcatcatc
gttcagaacgaaaaacgtatgcttcaggaagcagtcgatgctctgattgacaacggacgc
cgcggccgtccggttaccggaccgggtaaccgtccgctcaaatctctttctcatatgctg
aaagggaaacaagggcgtttccgtcagaaccttctcggtaaacgtgtagactactcagga
cgttccgttatcgtcgtaggtccgcacctgaaaatgtatcagtgcggattgccgaaggaa
atggcgcttgagctcttcaagccattcgttatgaaagagcttgttgaaaaaggtcttgct
cacaatatcaagagcgcaaaacgcaaaatcgaacgcgtgcagcctgaagtatgggatgta
cttgaatctgtcattaaggagcatccggtcttactgaaccgtgcccctacgcttcacaga
ttaggtatccaggctttcgaacctacgcttgttgaaggacgcgccatccgtcttcacccg
ttagtatgtacagcttataacgctgactttgacggtgaccaaatggcggttcacgtacct
ttatcagctgaggctcaagctgaggcgcgcattctgatgcttgcggctcaaaacatcttg
aaccctaaagatggtaaaccggttgttacgccgtctcaggatatggtattaggaaactac
tacctgacgcttgagcgcgccggagcagtcggcgaaggcatggtcttcaaaaatacggac
gaagcgcttcttgcttatcaaaacggatatgttcaccttcatacgagagtagccgttgcg
gcgaactccctgaagaatgtgacatttacggatgagcaacgttcaaaactgttaattaca
acagtcggtaagctggtcttcaatgaaattcttcctgagtcattcccttacatgaatgag
ccgtcgaagagcaacattgaagagaaaacacctgaccgtttcttcttagataaaggtgct
gacgtaaaagctgtgattgcagagcagccgatcaacgcaccgtttaaaaaaggtattctg
ggtaaaatcatcgcggaaatctttaaacgattccatatcacggaaacgtctaaaatgctt
gaccgcatgaaaaacctcggtttcagatattcaacgaaagccggcatcacagtaggggtt
tctgatatcgtcgttctcgatgataagcaggaaattcttgaagaagcacagagcaaagtt
gataatgtcatgaaacagttcagacgcggtttaatcactgaagaagaacgttatgaaaga
gttatttcaatttggagttcagcgaaggacgttatccaaggcaaactgatgaaatcatta
gacgaagtcaacccgatttacatgatgagtgattcaggagcccgtggtaacgcatctaac
tttacgcagcttgcgggtatgcggggtctgatggccaacccggctggacgaatcattgaa
ttgccgatcaaatcaagtttccgtgaaggtctgacagtattggagtactttatctccact
cacggtgcgcgtaaaggtcttgccgataccgccctgaaaacagctgactcaggttacctg
acacgccgtcttgttgatgttgcgcaggatgttatcattcgtgaaacagattgcggaact
gaccgcggtattcttgcaaaaccgcttaaagaaggtacggaaatcatcgagcgtctggaa
gagcgtctgatcggacgtttcgccagaaaacagatcaaacatcctgaaacgggtgctgtg
ctcattaacgaaaacgaattgatcgatgaagataaagcgctggaaatcgttgaagcagga
atcgaagaagtgtggatccgttctgcgtttacatgtaacactcctcatggtgtatgtaaa
cgatgctacggacgaaaccttgcaaccggaaccgacgttgaagtcggcgaagcagtaggc
attatcgccgcccaatctatcggtgagcctggaacacagttaacaatgcgtacgttccac
acaggcggggttgccggagacgatatcacacaaggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaagcgacgatttctgaaattgacggtacaattgccgaa
atcaatgaagtccgcgacaaacagcaggaaattgttgttcagggcgctgttgagacacgt
tcatacacggcaccttacaactcacgcctgaaagtggctgagggtgatcagattacccgc
ggccaagtcctgacagaaggttctatcgatccgaaagaacttcttaaagtcactgacctg
acaacggttcaggaatatcttctgcatgaggttcagaaggtttaccgtatgcagggggtt
gaaatcggcgataaacacgtagaagtaatggttcgccagatgcttcgcaaagtccgtgtg
atcgatgccggagatactgatgttcttcctggcacattgcttgatattcaccaattcaca
gaagcgaacaaaaaagtgctgcttgaaggcaatcgacctgctacaggccatcctgtcctt
ctcggtatcacgaaagcttcacttgagacagattcattcttgtctgccgcatcattccaa
gaaacaacacgcgttcttacagatgctgcgattaaaggcaagcgtgatgaacttctcggc
ctgaaagagaatgttatcatcggtaaactggttccggccggtaccggtatgatgaattac
agaaaagtaaaacctgtttcaaacgttcagcctgcggaagatatggttccggctgaataa

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