KEGG   Bipolaris zeicola: COCCADRAFT_90040
Entry
COCCADRAFT_90040  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K10884  ATP-dependent DNA helicase 2 subunit 1
Organism
bze  Bipolaris zeicola
Pathway
bze03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    COCCADRAFT_90040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bze03041]
    COCCADRAFT_90040
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_90040
Spliceosome [BR:bze03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    COCCADRAFT_90040
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     COCCADRAFT_90040
SSDB
Motif
Pfam: Ku Ku_N Ku_C SAP
Other DBs
NCBI-GeneID: 19152897
NCBI-ProteinID: XP_007709946
JGI: 90040
UniProt: W6YDQ5
LinkDB
Position
Unknown
AA seq 662 aa
MTDPQDNRLGEEEDDEDEEEIDDTSYKTIKDAVLFAVHVSPGMLEKPPKSEDKKAERDSP
TSAALKCAYQLMQQRIISNPNDMMGILLFGTEETDLKDGDSTFQHCYLLADLDVPSAQDV
KRLRDMVEDEEEAEKILKPAKDGASIATVLFCANQIFTTKAPNFSSRRLFLVTDNDYPVK
AKVDKDAAVTRARDLYDLGCTIDLFPISQLDHSFDRSRFYDDLVYPTSPSDPDAPVSIPS
TTKVAKSGEGISLLKQLISSINSKATPRRALFSLPLELGPNLKIGVKGYILIKRQEHVKS
CYVWVGGEKPQIVTSSTTHMADDTARTVEKAELRKAYKFGGDVITFTPEEITKIRQCFGE
PVIRIIGFKPLSSVPIWANTNKSTFIYPSEADYIGSTRVFSALQRKLLKSKKMGLVWFIP
RRNAAPILAALIPAEEKTNEEGEQVMPPGLWLVPLPFADDIRQFPTPPEEPLKTTDALTD
KMRLIIEQLQLPKGIYDPSRYPNPDLQWFYRILQALALEEELPEHPDDKTIPRFKQIDKR
CGEYIEDYGKEFQEVYAQQQKSALAHRTKPTAKKRPGGADAEVEEKKPAAKRVKKEPKGA
DGGDEDGGMTDQQMADINNSGQISKQTVAVLKQWLSARSQSITGKKADLLERVQEYLDGK
GL
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgacggaccctcaggacaaccgactaggtgaagaggaagatgacgaggacgaagaggaa
attgacgatactagttacaaaactattaaagatgctgttctcttcgccgtccatgtcagt
cccggtatgcttgaaaagccgcccaagtcagaagacaagaaagccgaacgcgactcacca
acctctgccgctctaaaatgtgcctaccaattaatgcagcagcgcatcatctcaaatcca
aacgatatgatgggcatactgctgtttggcacagaggaaacagacttgaaagacggtgac
agtacatttcagcactgctatctattggccgacctagatgttccatcagcgcaagacgtt
aaaagactgagagacatggtcgaggacgaggaagaagccgaaaagattctcaagccggca
aaggatggagccagcatagcaacagtgcttttttgcgcaaatcagatcttcaccaccaaa
gcaccaaacttctcgtcaagacgtctgttcctagtcaccgacaacgattatccggtcaaa
gccaaagtagacaaagatgctgcagtcacacgagcccgcgatctatacgacttgggctgc
accattgatctattccccatttcacaactagatcacagctttgacagatcacgcttttac
gatgatcttgtttatccaacatcaccatcagacccagatgcaccagtttctataccttct
accacgaaagttgcgaagagcggtgaaggcatttctctactgaaacaactcatctcttca
atcaactcgaaagccacacctcgccgtgctctattctcgttgccgctggaattaggcccc
aacttgaaaattggtgtaaagggatacatcttgatcaaacgccaggagcatgtcaagtca
tgctatgtatgggttggtggagagaaaccacaaatagtcacgtcttcaactacacatatg
gccgacgacactgcgcggactgtcgagaaggctgagctacggaaagcgtacaagttcggc
ggtgacgtgataacgttcacacctgaagaaatcacgaagatacggcaatgtttcggcgaa
cctgtcatacgtataattggcttcaagcctctttccagcgtacccatctgggcgaacacg
aacaagtcaacattcatttacccatcagaggcagactatatcggctcaacgcgtgtcttc
tcggcattacagcggaagctactaaagtccaagaagatgggtttagtatggtttattcca
cgccgtaacgctgcacctatcctagcagcactcattccagccgaagagaaaaccaacgag
gaaggcgagcaagtcatgccacctgggctctggctcgtacctcttcccttcgccgatgac
attcgccaattccctacacctcccgaagagcctctcaagactaccgatgccctaacagac
aagatgcgcctcatcatcgagcaactccaactaccaaaaggcatatacgatccttccaga
tatcccaatcctgatttacaatggttctaccgcattcttcaagccctcgcgttggaagag
gagctgccagagcatccagacgacaagaccataccgcgcttcaagcaaatcgacaagcgc
tgcggggaatatatagaagactacggcaaggagttccaggaagtatacgctcagcaacaa
aaatcagctcttgcacaccgtaccaaacccactgctaagaaacgccctggtggagccgat
gccgaagttgaagaaaagaaacctgcggctaagcgtgtgaagaaggagcctaagggggcg
gatggtggtgatgaagatggtggtatgacagatcagcagatggcagatatcaataacagc
gggcaaattagcaaacagactgttgctgtgttaaagcagtggctgagtgctaggagccag
agtatcacggggaagaaggcggatttgttggaacgggtgcaggagtatcttgatgggaag
gggctttga

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