Chlamydia abortus S26/3: CAB113
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Entry
CAB113 CDS
T00242
Symbol
rpoA
Name
(GenBank) putative DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cab
Chlamydia abortus S26/3
Pathway
cab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CAB113 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cab03021
]
CAB113 (rpoA)
03400 DNA repair and recombination proteins [BR:
cab03400
]
CAB113 (rpoA)
Enzymes [BR:
cab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CAB113 (rpoA)
Transcription machinery [BR:
cab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CAB113 (rpoA)
DNA repair and recombination proteins [BR:
cab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CAB113 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
CAH63571
UniProt:
Q5L6Z9
LinkDB
All DBs
Position
119032..120162
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AA seq
376 aa
AA seq
DB search
MSDCSQNLLYDKFELPESVKMMAVEGSGGSVDKQASFIAEPLERGMGHTLGNALRRALLI
GLEAPAIISFSMTGVLHEYMAINGIIEDVTNIILNLKGALLKKYPFQDSENGRCTQLLKS
KVSIDASDLAACGGQKAVTLADLLQEGGFESVNPDYVIFTVTQPMQLDITLRVAFGRGYT
TSERIVLEDKGVNEIVLDAAFSPVVLVNYFVEDTRVGQDTDFDRLILHVETDGRVSPKEA
LAFSTQILTKHFSIFEKMDEKKIVFEEAISLEKENKDDILHKLVLGINEIELSVRSTNCL
SNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLSQFGVGLDNVKE
KMKWYADKIRSKNGKG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattgttcacaaaatttactttacgataaatttgaattgccagagtcagtcaaa
atgatggctgtagaaggtagcgggggatcagttgataagcaggcgagtttcatagcagag
cctttagaaagaggtatgggtcatactttaggtaatgctttgagaagagctttgctcata
ggtttagaagctcctgcaattatttctttctctatgactggtgtgcttcatgagtacatg
gcaattaacggaattatagaagatgtaacaaatattatcttgaatttgaagggagcttta
ttaaagaagtatcctttccaagacagtgaaaatggccgttgtactcaattattaaagtct
aaagtttctatagacgcttctgatttagctgcctgtggtggtcagaaagctgttacattg
gctgatttgttgcaagaaggcgggtttgaatccgtgaaccccgattatgtgattttcact
gtgacacagcctatgcaattagatattactttaagagttgcttttggcagaggttatact
acatctgaaagaattgtccttgaggataagggtgtaaatgaaattgttttagacgcagct
ttctcacccgttgtcttggtaaattactttgtagaagatactcgtgtcggtcaagataca
gatttcgatcgtttgattttgcatgtagaaacagatggtagagtatcccctaaggaagct
ttagccttttctacacaaattttaaccaagcatttctccatttttgaaaaaatggatgaa
aagaagattgtctttgaagaagccatttctctcgaaaaagaaaataaagacgatattctt
cataagttagttttaggtattaacgagatcgagttatctgtaagatccacaaactgtttg
tctaatgcaaacattgaaaccataggggaattggtgattatgccagagcctcgcttgcta
cagttcagaaactttggtaaaaagtctctctgtgagattaaaaacaagttaaaagaaatg
aagttagaattgggcatggatcttagtcagttcggcgttggtttggacaacgtaaaagaa
aaaatgaagtggtatgccgataagattcggtctaaaaacggtaagggataa
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