Candidatus Cloacimonas acidaminovorans: CLOAM1733
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Entry
CLOAM1733 CDS
T04769
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
caci
Candidatus Cloacimonas acidaminovorans
Brite
KEGG Orthology (KO) [BR:
caci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caci03032
]
CLOAM1733 (topA)
03400 DNA repair and recombination proteins [BR:
caci03400
]
CLOAM1733 (topA)
Enzymes [BR:
caci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLOAM1733 (topA)
DNA replication proteins [BR:
caci03032
]
Prokaryotic type
DNA Topoisomerases
CLOAM1733 (topA)
DNA repair and recombination proteins [BR:
caci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLOAM1733 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Auto_anti-p27
Retrotrans_gag
Toprim_4
RNA_polI_A14
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
CAO81569
UniProt:
B0VJB5
LinkDB
All DBs
Position
2035506..2037725
Genome browser
AA seq
739 aa
AA seq
DB search
MSKGLIIVESPAKAGTISKFLKNQFSVKASMGHIRDLPKRELGVNVHQGFKPVYIIDKTK
SKVIAELKEATLSADSVYLASDNDREGEAIAWHLSETLKKELNNKPVYRIVFNEITSQAI
NEAIKNPGQIDMAKVEAQQARRILDRLVGYEISPLLWKVITKDLSAGRVQSVALRLICER
EAEIKAFVPKEYWKIEADFWKDNLPPFKAVLEKIEGKKVEIPDEKSAIEIVENSQNAEAI
LSEIKRSNRNVEPLPPFITSTLQQEASKILGFQAQKTMSIAQVLYEGIDLGGERTGLITY
MRTDSTRMAEEAITKAQNLIKERFGKELVHPKVRVFKNKQSAQDAHEAIRPTDPFRTPES
VAQYLTKEQMKLYTLIWQRFIATQMIPVKLLSTSVKINAGKAEFVSSGAQIMEEGFLKAY
PHLYIPLGEKIHQDYAKNDVLEHSPLEKTQHFTTSPARYTEASLIKELEAKGIGRPSTYA
TIIETLRKRKYVTMEKKAFLPTQLGSDVNRFLVDKFDYLFNVQFTAEMETKLDEVEYSNI
AWNEVVQEYYDQLVALIRQVDVKKEKNNFVQDTGIVCDVCKQGTMLIKHSKRGDFLSCSR
FPQCKNTKNFTRDEDGNIKIFVPTPLNENCPQCGSPLMLRTGKYGEFIACSNYPKCKYAR
PKTLGIKCPECGIGELTARKSKKGRTFYSCNRYPECKYITNDKPLPISCPKCGNPYIVEK
YSREKGKIKICPNCKTEME
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaggacttataatagtagaatcccctgcaaaagcaggaactatcagtaaattt
ctgaagaaccaattcagtgtgaaagcatcaatgggtcacattcgtgatttgcctaaacgc
gaactgggagttaatgtccatcagggtttcaaacccgtttatataatagataaaacgaaa
agcaaagtgattgcggaacttaaagaagcaactttatccgcggatagcgtttatctggca
agtgataatgatcgtgaaggagaagcaattgcctggcacttatccgaaaccctgaaaaag
gaactaaataataaacccgtctaccggattgtgtttaacgaaataacttcccaagcaatc
aatgaggcaatcaaaaaccccggtcaaattgatatggcaaaagtggaagcacaacaagca
agaagaatattagaccgcctggttggttatgaaatcagtcctttgctgtggaaagtgatt
accaaagacctttccgcgggaagagtgcaatcggttgctttgcgtttgatttgtgaacgc
gaggcagaaataaaagcatttgtccctaaagaatactggaaaattgaagcggacttttgg
aaagacaatttgcctccctttaaagctgtattggaaaaaatagaaggcaaaaaagtggaa
attccggatgagaaaagtgccatagaaatcgtggaaaacagccaaaatgcagaggcaatt
ttaagcgaaataaaacgcagcaatcgtaatgtagaaccccttccaccttttattaccagt
actttgcaacaggaagcaagtaaaatacttggttttcaggcacaaaaaacaatgagcatt
gctcaagttctatatgaaggtattgatttgggtggagaaagaaccggtctgataacttat
atgcgaaccgattctaccagaatggcggaagaggcaataactaaagctcaaaaccttata
aaagaacgctttggtaaagaactggtgcatccgaaagtccgagttttcaaaaataaacag
agtgctcaggatgcgcatgaagcaattcgtcctaccgatcctttcagaactcctgaaagc
gtagcgcagtatttaaccaaagaacagatgaaactttatacccttatctggcagcgtttt
atagctacgcaaatgataccggtaaaactcctttccacaagtgtaaagataaatgccgga
aaagcagaatttgtgtcttctggagctcaaataatggaagagggtttcctgaaagcatat
cctcacctttatattcctttgggcgaaaagattcatcaggattatgctaaaaatgatgtt
ctggaacatagtcctttggaaaagacacagcattttactacttctccggcaagatacact
gaggcatctttaatcaaagaactggaggcaaaagggattgggcgtccttctacttatgct
accattatagaaacattaagaaagcgtaaatatgttactatggagaaaaaggcatttttg
ccgacgcaattgggaagtgatgtaaaccgctttttggtggataagtttgattatcttttt
aatgttcagtttactgccgaaatggaaaccaaactggatgaagtggaatacagtaacatt
gcctggaatgaagtggtgcaggaatattacgaccaacttgttgccttaattcgtcaggta
gatgtgaagaaggagaaaaacaattttgttcaggataccggcattgtttgtgatgtttgc
aaacagggaacaatgttaatcaaacacagcaagaggggcgattttctttcctgcagccgt
tttccccaatgcaaaaacacgaagaattttacccgcgatgaagatggtaacatcaagatt
tttgtgcctacacccttaaatgagaattgtccgcaatgtggttctcccttaatgttaaga
accggaaaatatggagagtttattgcctgttccaattatcccaaatgcaaatatgcccgt
cctaaaaccttaggaattaaatgtccggaatgcggaatcggtgaattaacagcccgtaaa
tccaaaaaaggacgcaccttttattcctgcaatcgctatccagaatgtaaatatataact
aacgataaaccccttccaataagctgtcccaagtgtggaaatccttacatagtagaaaaa
tacagccgggaaaaaggaaaaattaaaatctgccccaactgcaaaaccgagatggaatag
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